BLASTX nr result

ID: Glycyrrhiza23_contig00033888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033888
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318937.1| chromatin remodeling complex subunit [Populu...   142   3e-32
ref|XP_002328309.1| chromatin remodeling complex subunit [Populu...   134   8e-30
ref|XP_002282476.2| PREDICTED: uncharacterized protein LOC100258...   125   4e-27
ref|XP_003520650.1| PREDICTED: uncharacterized protein LOC100813...   107   1e-21
gb|EEE64938.1| hypothetical protein OsJ_19808 [Oryza sativa Japo...   100   1e-19

>ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222857313|gb|EEE94860.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 2283

 Score =  142 bits (358), Expect = 3e-32
 Identities = 63/110 (57%), Positives = 90/110 (81%)
 Frame = +1

Query: 1   IVSTAASLHSWEDEFYQLDPSTDVVIYNGNKEMRNIIRRLEFYDEEHCILFQVLIVAPEV 180
           I++T+ASLHSWE+E ++L PS   V+Y+GNK++R  IR+LEFY E  CI+FQ+L+ +PEV
Sbjct: 638 IITTSASLHSWEEELFRLAPSLYAVVYHGNKDIRKSIRKLEFYSEGGCIMFQILVTSPEV 697

Query: 181 LVEDMDVLGGIEWEAIIVDECQSPKMSSYFKQIKMLNTHLRILLFRGQPK 330
           ++ED++VL  ++WEA+IVDECQS ++ S+FKQIKML T +R+LL  GQ K
Sbjct: 698 IIEDLNVLESMKWEAVIVDECQSSRIFSHFKQIKMLRTAMRLLLVNGQLK 747


>ref|XP_002328309.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222837824|gb|EEE76189.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1996

 Score =  134 bits (337), Expect = 8e-30
 Identities = 60/110 (54%), Positives = 88/110 (80%)
 Frame = +1

Query: 1   IVSTAASLHSWEDEFYQLDPSTDVVIYNGNKEMRNIIRRLEFYDEEHCILFQVLIVAPEV 180
           I++T+A+LHSWE+  ++L PS   V+Y+GNK++R  IR LEFY E  CI+FQ+LI +PEV
Sbjct: 271 IITTSAALHSWEEGLFRLAPSLYAVVYHGNKDIRKSIRTLEFYSEGGCIMFQILITSPEV 330

Query: 181 LVEDMDVLGGIEWEAIIVDECQSPKMSSYFKQIKMLNTHLRILLFRGQPK 330
           ++ED+++L  ++WEAIIVDECQ  ++ S+FKQIK+L+T +R+LL  GQ K
Sbjct: 331 IIEDLNMLESMKWEAIIVDECQRSRIYSHFKQIKLLSTAMRLLLVNGQLK 380


>ref|XP_002282476.2| PREDICTED: uncharacterized protein LOC100258707 [Vitis vinifera]
          Length = 1534

 Score =  125 bits (314), Expect = 4e-27
 Identities = 58/110 (52%), Positives = 84/110 (76%)
 Frame = +1

Query: 1   IVSTAASLHSWEDEFYQLDPSTDVVIYNGNKEMRNIIRRLEFYDEEHCILFQVLIVAPEV 180
           I+ST++ L  WE EF +L  S +VV+Y+GNK++R  IR +EFY+E  CI+F+VL+  PEV
Sbjct: 52  IISTSSVLPLWEAEFSRLASSVNVVVYSGNKDIRRSIRTMEFYEEGGCIMFEVLLAPPEV 111

Query: 181 LVEDMDVLGGIEWEAIIVDECQSPKMSSYFKQIKMLNTHLRILLFRGQPK 330
           +VED++VL  + WEA+I+DECQ P++SS+F + +ML   LR+LLF GQ K
Sbjct: 112 VVEDLEVLECLGWEAVIIDECQRPRISSHFAEYRMLVADLRLLLFSGQIK 161


>ref|XP_003520650.1| PREDICTED: uncharacterized protein LOC100813574 [Glycine max]
          Length = 1429

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/110 (45%), Positives = 77/110 (70%)
 Frame = +1

Query: 1   IVSTAASLHSWEDEFYQLDPSTDVVIYNGNKEMRNIIRRLEFYDEEHCILFQVLIVAPEV 180
           I+ST+A+L  WE EF +L PS ++V+Y G+++ R+ IR LEF++E   ILFQ+L+ +  +
Sbjct: 211 IISTSAALSVWETEFLRLAPSANLVVYKGDRDARSSIRALEFFNEHGGILFQILLSSSHI 270

Query: 181 LVEDMDVLGGIEWEAIIVDECQSPKMSSYFKQIKMLNTHLRILLFRGQPK 330
           +V+D+  L  I WEAII+DECQ  ++S +   IK+L   +R+LL  GQ K
Sbjct: 271 IVKDLHELRCITWEAIIIDECQQSRISGHLDDIKILKAEMRLLLVSGQIK 320


>gb|EEE64938.1| hypothetical protein OsJ_19808 [Oryza sativa Japonica Group]
          Length = 1922

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/104 (47%), Positives = 75/104 (72%)
 Frame = +1

Query: 1   IVSTAASLHSWEDEFYQLDPSTDVVIYNGNKEMRNIIRRLEFYDEEHCILFQVLIVAPEV 180
           IVST+ASL  WE +F +L PS +VV+YNG K++R  I+ LEFY E   + FQVL+  P+ 
Sbjct: 392 IVSTSASLSLWEAKFNRLAPSINVVVYNGEKDVRKQIQDLEFY-ENGLVTFQVLLSHPDA 450

Query: 181 LVEDMDVLGGIEWEAIIVDECQSPKMSSYFKQIKMLNTHLRILL 312
           ++ED+  +  I WEA++VD+CQS ++S   +Q+K L+T+ R++L
Sbjct: 451 ILEDIQTMESIVWEAVMVDDCQSLRVSKCLEQLKHLSTNFRMVL 494


Top