BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033880
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE80156.1| Ribonuclease H [Medicago truncatula]                    99   5e-19
gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas...    81   8e-14
gb|AEL30350.1| RNA-directed DNA polymerase [Arachis hypogaea]          75   7e-12
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    72   4e-11
gb|ABN08698.1| RNA-directed DNA polymerase ; Ribonuclease H, put...    71   1e-10

>gb|ABE80156.1| Ribonuclease H [Medicago truncatula]
          Length = 438

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 49/122 (40%), Positives = 67/122 (54%), Gaps = 4/122 (3%)
 Frame = -2

Query: 360 DSLTWD-SLDGNYSVKEGFRWLTKQHAIS---LPAANWNWIWCLQVPKKVKFLLWSE*HG 193
           D+L W  + +G YS K GF WL      +   +P  +W+WIW LQVP+K KFL+W     
Sbjct: 83  DALIWSQNKNGTYSTKSGFHWLLTFRVPATDIIPHPSWSWIWNLQVPEKYKFLIWLACQN 142

Query: 192 SNPVMKNKHKRGISQSGACSRCGYEEESFLHAVHDYPMVILFWQALGFTDHYRFFSELAV 13
             P +   H+R I+ S  C+RCG E+E+FLH V D       WQ +GFT +  F +  A 
Sbjct: 143 VVPTLSLLHRRNIAPSPTCARCGEEDETFLHCVRDCHFSRSIWQKIGFTGNDFFTATSAH 202

Query: 12  GW 7
            W
Sbjct: 203 DW 204


>gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 869

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 36/102 (35%), Positives = 52/102 (50%)
 Frame = -2

Query: 336 DGNYSVKEGFRWLTKQHAISLPAANWNWIWCLQVPKKVKFLLWSE*HGSNPVMKNKHKRG 157
           +G YS K G++WL           +W+WI   ++ +K KFL+W   H S P     H R 
Sbjct: 526 NGTYSAKSGYQWLLSLSGNDNNTHSWSWILKKKISEKYKFLIWLACHDSLPTAALLHHRQ 585

Query: 156 ISQSGACSRCGYEEESFLHAVHDYPMVILFWQALGFTDHYRF 31
           I  S  C+RCG  +ES  H + D P   + W  +GF++ Y F
Sbjct: 586 IIASATCARCGVSDESVFHCIRDCPFSKIIWHHIGFSEPYFF 627


>gb|AEL30350.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 673

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/96 (37%), Positives = 47/96 (48%)
 Frame = -2

Query: 327 YSVKEGFRWLTKQHAISLPAANWNWIWCLQVPKKVKFLLWSE*HGSNPVMKNKHKRGISQ 148
           Y  + G+ WL KQ        NW W+WC  VP+K KFL W     + P    + +RG+S 
Sbjct: 344 YDSRNGYLWLCKQLFGWEERENWLWLWCQLVPEKHKFLAWLCLKEALPTASFRFRRGMSS 403

Query: 147 SGACSRCGYEEESFLHAVHDYPMVILFWQALGFTDH 40
           S  C RC   +ES +H + D P   L WQ L    H
Sbjct: 404 SDRCPRCLSSQESVIHCIRDCPKAQLVWQRLDIPCH 439


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/83 (40%), Positives = 44/83 (53%)
 Frame = -2

Query: 261  WNWIWCLQVPKKVKFLLWSE*HGSNPVMKNKHKRGISQSGACSRCGYEEESFLHAVHDYP 82
            W+WIW L  P+K K L+W   H + P +   H R ++ +  CSRCG  +ESFLH V D  
Sbjct: 977  WSWIWQLTAPEKYKLLIWLACHNAAPTLSLLHHRKMAPAATCSRCGENDESFLHCVRDCK 1036

Query: 81   MVILFWQALGFTDHYRFFSELAV 13
                 W  LGF     FFS  +V
Sbjct: 1037 HSAAIWHKLGFVT-AAFFSVSSV 1058


>gb|ABN08698.1| RNA-directed DNA polymerase ; Ribonuclease H, putative [Medicago
           truncatula]
          Length = 86

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
 Frame = -2

Query: 282 ISLP--AANWNWIWCLQVPKKVKFLLWSE*HGSNPVMKNKHKRGISQSGACSRCGYEEES 109
           ++LP  + +W WIW L++P+K+KFL+W   H S P +   + R I+ +  CSRC    E+
Sbjct: 4   VTLPNSSLSWVWIWKLKLPEKIKFLVWLACHNSVPTISLLNHRNIAPTATCSRCNLHVET 63

Query: 108 FLHAVHDYPMVILFWQALGFTD 43
           FLH VHD       WQ   F D
Sbjct: 64  FLHCVHDCHNSKNIWQHSRFND 85