BLASTX nr result
ID: Glycyrrhiza23_contig00033875
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00033875
(326 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containi... 199 3e-49
emb|CBI22025.3| unnamed protein product [Vitis vinifera] 155 3e-36
ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containi... 155 3e-36
ref|XP_002514539.1| pentatricopeptide repeat-containing protein,... 153 1e-35
ref|XP_002322810.1| predicted protein [Populus trichocarpa] gi|2... 150 1e-34
>ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Glycine max]
Length = 674
Score = 199 bits (505), Expect = 3e-49
Identities = 93/108 (86%), Positives = 99/108 (91%)
Frame = +2
Query: 2 KFGMNEDSLFLCSRMNELGFMPDEYSLGSVLRGCAHLGALFAGQQVHAYVMKCGFEFNLV 181
KF MNE++L L SRMNEL FMPDEYSLGSVLRGCAHLGAL AGQQVHAYVMKCGFE NLV
Sbjct: 178 KFEMNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLV 237
Query: 182 VGCSLAHMYMKAGSLHDGERVIRWMPNCNLVAWNTLMAGKAQNRYFEG 325
VGCSLAHMYMKAGS+HDGERVI WMP+C+LVAWNTLM+GKAQ YFEG
Sbjct: 238 VGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEG 285
>emb|CBI22025.3| unnamed protein product [Vitis vinifera]
Length = 489
Score = 155 bits (392), Expect = 3e-36
Identities = 77/107 (71%), Positives = 89/107 (83%)
Frame = +2
Query: 2 KFGMNEDSLFLCSRMNELGFMPDEYSLGSVLRGCAHLGALFAGQQVHAYVMKCGFEFNLV 181
+F NE+ L L SRMNELGF+PDE++LGSVLRGCA L AL AG+QVH YV KCGFEFNLV
Sbjct: 161 QFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLV 220
Query: 182 VGCSLAHMYMKAGSLHDGERVIRWMPNCNLVAWNTLMAGKAQNRYFE 322
V SLAHMYMK GSL +GER+IR MP+ N+VAWNTL+AG+AQN Y E
Sbjct: 221 VVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPE 267
Score = 58.5 bits (140), Expect = 5e-07
Identities = 33/96 (34%), Positives = 50/96 (52%)
Frame = +2
Query: 8 GMNEDSLFLCSRMNELGFMPDEYSLGSVLRGCAHLGALFAGQQVHAYVMKCGFEFNLVVG 187
G E+ L + M GF PD+ + SV+ C+ L L GQQ+HA V+K G + V
Sbjct: 264 GYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVI 323
Query: 188 CSLAHMYMKAGSLHDGERVIRWMPNCNLVAWNTLMA 295
SL MY + G L +V N ++V W++++A
Sbjct: 324 SSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIA 359
>ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 155 bits (392), Expect = 3e-36
Identities = 77/107 (71%), Positives = 89/107 (83%)
Frame = +2
Query: 2 KFGMNEDSLFLCSRMNELGFMPDEYSLGSVLRGCAHLGALFAGQQVHAYVMKCGFEFNLV 181
+F NE+ L L SRMNELGF+PDE++LGSVLRGCA L AL AG+QVH YV KCGFEFNLV
Sbjct: 161 QFEFNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLV 220
Query: 182 VGCSLAHMYMKAGSLHDGERVIRWMPNCNLVAWNTLMAGKAQNRYFE 322
V SLAHMYMK GSL +GER+IR MP+ N+VAWNTL+AG+AQN Y E
Sbjct: 221 VVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPE 267
Score = 58.5 bits (140), Expect = 5e-07
Identities = 33/96 (34%), Positives = 50/96 (52%)
Frame = +2
Query: 8 GMNEDSLFLCSRMNELGFMPDEYSLGSVLRGCAHLGALFAGQQVHAYVMKCGFEFNLVVG 187
G E+ L + M GF PD+ + SV+ C+ L L GQQ+HA V+K G + V
Sbjct: 264 GYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVI 323
Query: 188 CSLAHMYMKAGSLHDGERVIRWMPNCNLVAWNTLMA 295
SL MY + G L +V N ++V W++++A
Sbjct: 324 SSLISMYSRCGCLEYSLKVFLECENGDVVCWSSMIA 359
>ref|XP_002514539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223546143|gb|EEF47645.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 332
Score = 153 bits (387), Expect = 1e-35
Identities = 73/107 (68%), Positives = 91/107 (85%)
Frame = +2
Query: 2 KFGMNEDSLFLCSRMNELGFMPDEYSLGSVLRGCAHLGALFAGQQVHAYVMKCGFEFNLV 181
+F +NE+ L L M ELGF+PDEY+LGSVLRGCA L +++AG+QVH YV+KCGFEFNLV
Sbjct: 66 QFEINEEGLNLFRDMYELGFLPDEYTLGSVLRGCAGLKSMYAGRQVHCYVVKCGFEFNLV 125
Query: 182 VGCSLAHMYMKAGSLHDGERVIRWMPNCNLVAWNTLMAGKAQNRYFE 322
VG SLAHMYMK+GSL +GERVI+ MP+ N+VAWNTL+AGK+QN + E
Sbjct: 126 VGSSLAHMYMKSGSLSEGERVIKSMPSRNIVAWNTLIAGKSQNGHSE 172
Score = 65.5 bits (158), Expect = 4e-09
Identities = 33/96 (34%), Positives = 54/96 (56%)
Frame = +2
Query: 8 GMNEDSLFLCSRMNELGFMPDEYSLGSVLRGCAHLGALFAGQQVHAYVMKCGFEFNLVVG 187
G +E+ L L + M +GF PD+ + SV+ C+ L L GQQ+HA V+K G + V
Sbjct: 169 GHSEEVLDLYNMMRIMGFRPDKITFASVISSCSELTTLGQGQQIHAEVIKAGASSVVAVT 228
Query: 188 CSLAHMYMKAGSLHDGERVIRWMPNCNLVAWNTLMA 295
SL MY + G L D +V + +++ W++++A
Sbjct: 229 SSLISMYSRCGCLEDSVKVFLECKDVDVILWSSMIA 264
>ref|XP_002322810.1| predicted protein [Populus trichocarpa] gi|222867440|gb|EEF04571.1|
predicted protein [Populus trichocarpa]
Length = 562
Score = 150 bits (379), Expect = 1e-34
Identities = 73/108 (67%), Positives = 90/108 (83%)
Frame = +2
Query: 2 KFGMNEDSLFLCSRMNELGFMPDEYSLGSVLRGCAHLGALFAGQQVHAYVMKCGFEFNLV 181
+F NE+ LFL M+ELGF+PDE++LGSVLRGCA L A +AG+QVHAYV+K G+EFNLV
Sbjct: 66 QFEFNENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLV 125
Query: 182 VGCSLAHMYMKAGSLHDGERVIRWMPNCNLVAWNTLMAGKAQNRYFEG 325
VG SLAHMYMK+GSL +GE+VI+ M N+VAWNTL+AG AQN +FEG
Sbjct: 126 VGSSLAHMYMKSGSLGEGEKVIKAMRIRNVVAWNTLIAGNAQNGHFEG 173
Score = 57.8 bits (138), Expect = 9e-07
Identities = 34/96 (35%), Positives = 49/96 (51%)
Frame = +2
Query: 8 GMNEDSLFLCSRMNELGFMPDEYSLGSVLRGCAHLGALFAGQQVHAYVMKCGFEFNLVVG 187
G E L L + M G PD+ +L SV+ A L LF GQQ+HA +K G + V
Sbjct: 169 GHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVAVL 228
Query: 188 CSLAHMYMKAGSLHDGERVIRWMPNCNLVAWNTLMA 295
SL MY K G L D + + + + V W++++A
Sbjct: 229 SSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIA 264