BLASTX nr result
ID: Glycyrrhiza23_contig00033866
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00033866
(279 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat... 169 3e-40
ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat... 126 2e-27
ref|XP_002524089.1| pentatricopeptide repeat-containing protein,... 117 1e-24
ref|XP_002308333.1| predicted protein [Populus trichocarpa] gi|2... 117 1e-24
ref|XP_002333469.1| predicted protein [Populus trichocarpa] gi|2... 117 1e-24
>ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Glycine max]
Length = 1034
Score = 169 bits (427), Expect = 3e-40
Identities = 80/92 (86%), Positives = 87/92 (94%)
Frame = +2
Query: 2 LKRCFKMPQLALRVFNWLKHKDGFSHTTQTYNTMLCIAGEAKEFGLVKKLVEEMDECEVQ 181
LKRCFK+PQLALRVFNWLK KDGFSHTT+TYNTML IA EAKEFGLVKKLVEEMDEC +Q
Sbjct: 163 LKRCFKVPQLALRVFNWLKLKDGFSHTTRTYNTMLHIAREAKEFGLVKKLVEEMDECGIQ 222
Query: 182 KDVNTWTILISHYGKANKISDALLAFENMQRC 277
KDVNTWTI+I+HYGKA KIS+ALLAFENM+RC
Sbjct: 223 KDVNTWTIIINHYGKARKISEALLAFENMKRC 254
>ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Vitis vinifera]
Length = 1048
Score = 126 bits (316), Expect = 2e-27
Identities = 60/89 (67%), Positives = 71/89 (79%)
Frame = +2
Query: 2 LKRCFKMPQLALRVFNWLKHKDGFSHTTQTYNTMLCIAGEAKEFGLVKKLVEEMDECEVQ 181
LKRCFK+P LALR FNW+K ++G HTT+TYNTML IAGEAKEFGLV+KL+ EM+E +
Sbjct: 178 LKRCFKVPHLALRFFNWVKFRNGGCHTTRTYNTMLYIAGEAKEFGLVEKLIGEMEEKGCK 237
Query: 182 KDVNTWTILISHYGKANKISDALLAFENM 268
+D+ TWTILISHYGKA I ALL E M
Sbjct: 238 RDIKTWTILISHYGKAKLIGKALLILEKM 266
Score = 62.8 bits (151), Expect = 3e-08
Identities = 34/90 (37%), Positives = 49/90 (54%)
Frame = +2
Query: 2 LKRCFKMPQLALRVFNWLKHKDGFSHTTQTYNTMLCIAGEAKEFGLVKKLVEEMDECEVQ 181
L+ C AL F+W+ +DG+SHTT+TYN + I+G +K F ++ L EM
Sbjct: 670 LRSCSLHGHAALLFFSWVGKRDGYSHTTETYNMGIKISGCSKNFRSMRNLFFEMRRKGHP 729
Query: 182 KDVNTWTILISHYGKANKISDALLAFENMQ 271
+TWTI+I YG+A AL F M+
Sbjct: 730 VTPDTWTIMIMQYGRAGLTEIALRNFAEMK 759
>ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536657|gb|EEF38299.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1072
Score = 117 bits (293), Expect = 1e-24
Identities = 56/90 (62%), Positives = 69/90 (76%)
Frame = +2
Query: 2 LKRCFKMPQLALRVFNWLKHKDGFSHTTQTYNTMLCIAGEAKEFGLVKKLVEEMDECEVQ 181
LKRCFK+P LA R F+W+K +DGF HTT+TY TML IAGEAKEF +V LVEEM++ +
Sbjct: 183 LKRCFKVPHLAFRFFSWVKMRDGFCHTTKTYYTMLYIAGEAKEFKVVDDLVEEMEKNSCE 242
Query: 182 KDVNTWTILISHYGKANKISDALLAFENMQ 271
KD+ TW+ILIS +GKA I ALL FE M+
Sbjct: 243 KDIKTWSILISQFGKAKLIGKALLFFEKMK 272
Score = 55.5 bits (132), Expect = 4e-06
Identities = 29/90 (32%), Positives = 44/90 (48%)
Frame = +2
Query: 2 LKRCFKMPQLALRVFNWLKHKDGFSHTTQTYNTMLCIAGEAKEFGLVKKLVEEMDECEVQ 181
L C AL+ F+WL + G+ HT +TYN + I+G K+F ++ L EM
Sbjct: 692 LHNCSMHGNAALKFFSWLGVQTGYCHTKETYNMAMKISGREKDFKHMRSLFYEMRRKGCL 751
Query: 182 KDVNTWTILISHYGKANKISDALLAFENMQ 271
+TW I+I YG+ +L F M+
Sbjct: 752 ITPDTWAIMIMQYGRTGLTEISLKTFTEMK 781
>ref|XP_002308333.1| predicted protein [Populus trichocarpa] gi|222854309|gb|EEE91856.1|
predicted protein [Populus trichocarpa]
Length = 1048
Score = 117 bits (293), Expect = 1e-24
Identities = 53/91 (58%), Positives = 68/91 (74%)
Frame = +2
Query: 2 LKRCFKMPQLALRVFNWLKHKDGFSHTTQTYNTMLCIAGEAKEFGLVKKLVEEMDECEVQ 181
LKRC+K+P LA R FNW+K KDGF HTT+TYNTML AGEA+EF +V L+EEM++ +
Sbjct: 177 LKRCYKVPHLAYRFFNWVKTKDGFCHTTKTYNTMLYTAGEAREFSVVDVLLEEMEKYSCE 236
Query: 182 KDVNTWTILISHYGKANKISDALLAFENMQR 274
+D+ TWTILI YGKA + ALL E M++
Sbjct: 237 RDIKTWTILIQQYGKAKLVGKALLVHEKMRK 267
Score = 55.5 bits (132), Expect = 4e-06
Identities = 29/90 (32%), Positives = 44/90 (48%)
Frame = +2
Query: 2 LKRCFKMPQLALRVFNWLKHKDGFSHTTQTYNTMLCIAGEAKEFGLVKKLVEEMDECEVQ 181
L+ C AL F W+ ++GF TT+TYN + ++G K+F ++ L EM
Sbjct: 669 LRNCGMHGNAALHFFAWVGKQNGFCQTTETYNMAMKVSGRGKDFKHMRSLFYEMRRRGFL 728
Query: 182 KDVNTWTILISHYGKANKISDALLAFENMQ 271
+TW I+I YG+ AL F M+
Sbjct: 729 IPPDTWAIMIMQYGRTGLTEIALKIFGEMK 758
>ref|XP_002333469.1| predicted protein [Populus trichocarpa] gi|222836989|gb|EEE75382.1|
predicted protein [Populus trichocarpa]
Length = 1048
Score = 117 bits (293), Expect = 1e-24
Identities = 54/91 (59%), Positives = 68/91 (74%)
Frame = +2
Query: 2 LKRCFKMPQLALRVFNWLKHKDGFSHTTQTYNTMLCIAGEAKEFGLVKKLVEEMDECEVQ 181
LKRC+K+P LA R FNW+K KDGF HTT+TYNTML AGEA+EF +V L+EEM++ +
Sbjct: 177 LKRCYKVPHLAYRFFNWVKTKDGFCHTTKTYNTMLYTAGEAREFSVVDVLLEEMEKYSCE 236
Query: 182 KDVNTWTILISHYGKANKISDALLAFENMQR 274
+D+ TWTILI YGKA I ALL E M++
Sbjct: 237 RDIKTWTILIRQYGKAKLIGKALLVHEKMRK 267
Score = 55.5 bits (132), Expect = 4e-06
Identities = 29/90 (32%), Positives = 44/90 (48%)
Frame = +2
Query: 2 LKRCFKMPQLALRVFNWLKHKDGFSHTTQTYNTMLCIAGEAKEFGLVKKLVEEMDECEVQ 181
L+ C AL F W+ ++GF TT+TYN + ++G K+F ++ L EM
Sbjct: 669 LRNCGMHGNAALHFFAWVGKQNGFCQTTETYNMAMKVSGRGKDFKHMRSLFYEMRRRGFL 728
Query: 182 KDVNTWTILISHYGKANKISDALLAFENMQ 271
+TW I+I YG+ AL F M+
Sbjct: 729 IPPDTWAIMIMQYGRTGLTEIALKIFGEMK 758