BLASTX nr result

ID: Glycyrrhiza23_contig00033811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033811
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589917.1| Putative chloroplast RF19 [Medicago truncatu...   112   4e-23
ref|XP_003604157.1| hypothetical protein MTR_4g006080 [Medicago ...   111   7e-23
ref|XP_003621686.1| 30S ribosomal protein S15 [Medicago truncatu...   111   7e-23
gb|ABN08785.1| Hypothetical 214.8 kDa protein ycf1, putative [Me...   111   7e-23
ref|YP_001381682.1| hypothetical chloroplast RF1 [Medicago trunc...   110   9e-23

>ref|XP_003589917.1| Putative chloroplast RF19 [Medicago truncatula]
           gi|355478965|gb|AES60168.1| Putative chloroplast RF19
           [Medicago truncatula]
          Length = 236

 Score =  112 bits (279), Expect = 4e-23
 Identities = 62/90 (68%), Positives = 70/90 (77%), Gaps = 8/90 (8%)
 Frame = -3

Query: 250 QKIDELSESKKDSTISNNN---PMIYESPVVIQSINWTNSSLTEKKIKDLNVKTKTIINQ 80
           + IDELSESKK STIS NN    +I ESPV ++SINWTNSS TEK+IKDLN+KTKTII Q
Sbjct: 53  ETIDELSESKKTSTISKNNLKIEVIEESPVKMESINWTNSSFTEKRIKDLNIKTKTIIKQ 112

Query: 79  IEKMGE-----IITSENNFNSNKTTYDAQR 5
           IE M E     I+TSE N NSNKTTYDA+R
Sbjct: 113 IETMTEEKKEGILTSEINLNSNKTTYDAKR 142


>ref|XP_003604157.1| hypothetical protein MTR_4g006080 [Medicago truncatula]
            gi|355505212|gb|AES86354.1| hypothetical protein
            MTR_4g006080 [Medicago truncatula]
          Length = 1698

 Score =  111 bits (277), Expect = 7e-23
 Identities = 63/93 (67%), Positives = 70/93 (75%), Gaps = 11/93 (11%)
 Frame = -3

Query: 250  QKIDELSESKKDSTISNNNP------MIYESPVVIQSINWTNSSLTEKKIKDLNVKTKTI 89
            + IDELSESKK STIS NN       +I ESPV ++SINWTNSS TEK+IKDLNVKTKTI
Sbjct: 963  ETIDELSESKKTSTISKNNSKIEVIEVIEESPVKMESINWTNSSFTEKRIKDLNVKTKTI 1022

Query: 88   INQIEKMGE-----IITSENNFNSNKTTYDAQR 5
            I QIE M E     I+TSE N NSNKTTYDA+R
Sbjct: 1023 IKQIETMTEEKKEGILTSEINLNSNKTTYDAKR 1055


>ref|XP_003621686.1| 30S ribosomal protein S15 [Medicago truncatula]
           gi|355496701|gb|AES77904.1| 30S ribosomal protein S15
           [Medicago truncatula]
          Length = 1351

 Score =  111 bits (277), Expect = 7e-23
 Identities = 63/93 (67%), Positives = 70/93 (75%), Gaps = 11/93 (11%)
 Frame = -3

Query: 250 QKIDELSESKKDSTISNNNP------MIYESPVVIQSINWTNSSLTEKKIKDLNVKTKTI 89
           + IDELSESKK STIS NN       +I ESPV ++SINWTNSS TEK+IKDLNVKTKTI
Sbjct: 524 ETIDELSESKKTSTISKNNSKIEVIEVIEESPVKMESINWTNSSFTEKRIKDLNVKTKTI 583

Query: 88  INQIEKMGE-----IITSENNFNSNKTTYDAQR 5
           I QIE M E     I+TSE N NSNKTTYDA+R
Sbjct: 584 IKQIETMTEEKKEGILTSEINLNSNKTTYDAKR 616


>gb|ABN08785.1| Hypothetical 214.8 kDa protein ycf1, putative [Medicago truncatula]
          Length = 175

 Score =  111 bits (277), Expect = 7e-23
 Identities = 63/93 (67%), Positives = 70/93 (75%), Gaps = 11/93 (11%)
 Frame = -3

Query: 250 QKIDELSESKKDSTISNNNP------MIYESPVVIQSINWTNSSLTEKKIKDLNVKTKTI 89
           + IDELSESKK STIS NN       +I ESPV ++SINWTNSS TEK+IKDLNVKTKTI
Sbjct: 26  ETIDELSESKKTSTISKNNSKIEVIEVIEESPVKMESINWTNSSFTEKRIKDLNVKTKTI 85

Query: 88  INQIEKMGE-----IITSENNFNSNKTTYDAQR 5
           I QIE M E     I+TSE N NSNKTTYDA+R
Sbjct: 86  IKQIETMTEEKKEGILTSEINLNSNKTTYDAKR 118


>ref|YP_001381682.1| hypothetical chloroplast RF1 [Medicago truncatula]
          Length = 1760

 Score =  110 bits (276), Expect = 9e-23
 Identities = 63/91 (69%), Positives = 69/91 (75%), Gaps = 11/91 (12%)
 Frame = -3

Query: 244  IDELSESKKDSTISNNNP------MIYESPVVIQSINWTNSSLTEKKIKDLNVKTKTIIN 83
            IDELSESKK STIS NN       +I ESPV ++SINWTNSS TEK+IKDLNVKTKTII 
Sbjct: 1000 IDELSESKKTSTISKNNSKIEVIEVIEESPVKMESINWTNSSFTEKRIKDLNVKTKTIIK 1059

Query: 82   QIEKMGE-----IITSENNFNSNKTTYDAQR 5
            QIE M E     I+TSE N NSNKTTYDA+R
Sbjct: 1060 QIETMTEEKKEGILTSEINLNSNKTTYDAKR 1090


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