BLASTX nr result
ID: Glycyrrhiza23_contig00033789
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00033789 (285 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containi... 82 5e-14 emb|CBI26396.3| unnamed protein product [Vitis vinifera] 67 2e-09 ref|XP_002331415.1| predicted protein [Populus trichocarpa] gi|2... 65 8e-09 ref|XP_004137641.1| PREDICTED: pentatricopeptide repeat-containi... 59 4e-07 ref|XP_002300144.1| predicted protein [Populus trichocarpa] gi|2... 52 8e-06 >ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial-like [Glycine max] Length = 615 Score = 82.0 bits (201), Expect = 5e-14 Identities = 38/43 (88%), Positives = 41/43 (95%) Frame = +1 Query: 1 GSYVLMANLYTSLGKWKEAYMMRNLIDGKGLVKEYGWSQVEVS 129 GSYVLMANLYTSLGKWKEA+MMRN +DGKGLVKE GWSQVEV+ Sbjct: 558 GSYVLMANLYTSLGKWKEAHMMRNSMDGKGLVKESGWSQVEVT 600 >emb|CBI26396.3| unnamed protein product [Vitis vinifera] Length = 667 Score = 67.0 bits (162), Expect = 2e-09 Identities = 28/44 (63%), Positives = 37/44 (84%) Frame = +1 Query: 1 GSYVLMANLYTSLGKWKEAYMMRNLIDGKGLVKEYGWSQVEVSG 132 G++VLM NLYTS+GKWKEA R++I+ +GLVKE GWSQ+E+ G Sbjct: 532 GNFVLMTNLYTSMGKWKEAAKARSIINARGLVKEPGWSQIEIDG 575 >ref|XP_002331415.1| predicted protein [Populus trichocarpa] gi|222873629|gb|EEF10760.1| predicted protein [Populus trichocarpa] Length = 458 Score = 64.7 bits (156), Expect = 8e-09 Identities = 29/43 (67%), Positives = 37/43 (86%) Frame = +1 Query: 4 SYVLMANLYTSLGKWKEAYMMRNLIDGKGLVKEYGWSQVEVSG 132 +YVLMANLYTS+GKWKEA + R+L+ +GLVK GWSQVE++G Sbjct: 291 NYVLMANLYTSMGKWKEAAVTRSLMIDRGLVKAPGWSQVEING 333 >ref|XP_004137641.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Cucumis sativus] gi|449514868|ref|XP_004164502.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Cucumis sativus] Length = 601 Score = 58.9 bits (141), Expect = 4e-07 Identities = 28/39 (71%), Positives = 34/39 (87%) Frame = +1 Query: 4 SYVLMANLYTSLGKWKEAYMMRNLIDGKGLVKEYGWSQV 120 ++VLMANLYTS+GKWKEA +R+LID KGLVKE G SQ+ Sbjct: 563 NHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 601 >ref|XP_002300144.1| predicted protein [Populus trichocarpa] gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa] Length = 666 Score = 51.6 bits (122), Expect(2) = 8e-06 Identities = 23/45 (51%), Positives = 31/45 (68%) Frame = +1 Query: 1 GSYVLMANLYTSLGKWKEAYMMRNLIDGKGLVKEYGWSQVEVSGR 135 G YVL+AN+Y G+WK+ MR L+ +GLVK G+S VE+ GR Sbjct: 498 GYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGR 542 Score = 22.7 bits (47), Expect(2) = 8e-06 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = +3 Query: 171 IHRTLEELNFTLQEGSYTAETVTV 242 I++ LEEL+ LQE Y +V Sbjct: 559 IYKYLEELSVKLQEAGYVPNMASV 582