BLASTX nr result

ID: Glycyrrhiza23_contig00033789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033789
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containi...    82   5e-14
emb|CBI26396.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002331415.1| predicted protein [Populus trichocarpa] gi|2...    65   8e-09
ref|XP_004137641.1| PREDICTED: pentatricopeptide repeat-containi...    59   4e-07
ref|XP_002300144.1| predicted protein [Populus trichocarpa] gi|2...    52   8e-06

>ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Glycine max]
          Length = 615

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 38/43 (88%), Positives = 41/43 (95%)
 Frame = +1

Query: 1   GSYVLMANLYTSLGKWKEAYMMRNLIDGKGLVKEYGWSQVEVS 129
           GSYVLMANLYTSLGKWKEA+MMRN +DGKGLVKE GWSQVEV+
Sbjct: 558 GSYVLMANLYTSLGKWKEAHMMRNSMDGKGLVKESGWSQVEVT 600


>emb|CBI26396.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 28/44 (63%), Positives = 37/44 (84%)
 Frame = +1

Query: 1   GSYVLMANLYTSLGKWKEAYMMRNLIDGKGLVKEYGWSQVEVSG 132
           G++VLM NLYTS+GKWKEA   R++I+ +GLVKE GWSQ+E+ G
Sbjct: 532 GNFVLMTNLYTSMGKWKEAAKARSIINARGLVKEPGWSQIEIDG 575


>ref|XP_002331415.1| predicted protein [Populus trichocarpa] gi|222873629|gb|EEF10760.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 29/43 (67%), Positives = 37/43 (86%)
 Frame = +1

Query: 4   SYVLMANLYTSLGKWKEAYMMRNLIDGKGLVKEYGWSQVEVSG 132
           +YVLMANLYTS+GKWKEA + R+L+  +GLVK  GWSQVE++G
Sbjct: 291 NYVLMANLYTSMGKWKEAAVTRSLMIDRGLVKAPGWSQVEING 333


>ref|XP_004137641.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
           gi|449514868|ref|XP_004164502.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 601

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/39 (71%), Positives = 34/39 (87%)
 Frame = +1

Query: 4   SYVLMANLYTSLGKWKEAYMMRNLIDGKGLVKEYGWSQV 120
           ++VLMANLYTS+GKWKEA  +R+LID KGLVKE G SQ+
Sbjct: 563 NHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 601


>ref|XP_002300144.1| predicted protein [Populus trichocarpa] gi|222847402|gb|EEE84949.1|
           predicted protein [Populus trichocarpa]
          Length = 666

 Score = 51.6 bits (122), Expect(2) = 8e-06
 Identities = 23/45 (51%), Positives = 31/45 (68%)
 Frame = +1

Query: 1   GSYVLMANLYTSLGKWKEAYMMRNLIDGKGLVKEYGWSQVEVSGR 135
           G YVL+AN+Y   G+WK+   MR L+  +GLVK  G+S VE+ GR
Sbjct: 498 GYYVLLANIYADAGRWKDVERMRILVKDRGLVKPPGYSLVELKGR 542



 Score = 22.7 bits (47), Expect(2) = 8e-06
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 171 IHRTLEELNFTLQEGSYTAETVTV 242
           I++ LEEL+  LQE  Y     +V
Sbjct: 559 IYKYLEELSVKLQEAGYVPNMASV 582


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