BLASTX nr result

ID: Glycyrrhiza23_contig00033784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033784
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521087.1| PREDICTED: squamosa promoter-binding-like pr...    72   5e-11
ref|XP_003530168.1| PREDICTED: squamosa promoter-binding-like pr...    69   3e-10
gb|AFC17960.1| squamosa promoter binding protein-like 8 [Betula ...    59   4e-07
ref|XP_003626693.1| Squamosa promoter binding protein [Medicago ...    55   6e-06

>ref|XP_003521087.1| PREDICTED: squamosa promoter-binding-like protein 8-like [Glycine
           max]
          Length = 336

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 48/119 (40%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
 Frame = -2

Query: 309 SHNHHNHVFDTRAFTGAXXXXXXXXXXXXXXXXXXXXPVNASHCGLGP------------ 166
           +H+HH+  FD RAF GA                     VNA   G GP            
Sbjct: 84  NHHHHHAFFDPRAFHGASNTSYPPPHSMLSLDPLPH--VNAVGPGHGPGSGPGGLLLVPK 141

Query: 165 -QDVGRPVDFVXXXXXXXXXXRTYFATSNDNLVNRLYRGSKAVEPG---SANSPRCQAK 1
            +DVGRP+DFV          RTYF++S D+ V+RLYR S+ VEPG   S+NSPRCQA+
Sbjct: 142 SEDVGRPMDFVGSRIGLNLGGRTYFSSSEDDFVSRLYRRSRPVEPGSTASSNSPRCQAE 200


>ref|XP_003530168.1| PREDICTED: squamosa promoter-binding-like protein 8-like [Glycine
           max]
          Length = 338

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 45/120 (37%), Positives = 57/120 (47%), Gaps = 18/120 (15%)
 Frame = -2

Query: 306 HNHHNHVFDTRAFTGAXXXXXXXXXXXXXXXXXXXXPVNASHCGLGP------------- 166
           H+HH+  FD RAF GA                        S  G GP             
Sbjct: 83  HHHHHAFFDPRAFHGASNTSYPPPPSMLSLDPLPHVNAVGSGPGHGPGPGPGPGGLLLVP 142

Query: 165 --QDVGRPVDFVXXXXXXXXXXRTYFATSNDNLVNRLYRGSKAVEPG---SANSPRCQAK 1
             ++VGRP+DFV          RTYF++S D+ V+RLYR S+ VEPG   S+NSPRCQA+
Sbjct: 143 KSEEVGRPMDFVGSRIGLNLGGRTYFSSSEDDFVSRLYRRSRPVEPGSTISSNSPRCQAE 202


>gb|AFC17960.1| squamosa promoter binding protein-like 8 [Betula platyphylla]
          Length = 309

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 43/121 (35%), Positives = 53/121 (43%), Gaps = 12/121 (9%)
 Frame = -2

Query: 327 PATTGFSHNH---------HNHVFDTRAFTGAXXXXXXXXXXXXXXXXXXXXPVNASHCG 175
           PATT FSH +         H+  FD RA+                         +     
Sbjct: 48  PATTAFSHFNPPQQTHSQLHHSFFDPRAYPQPSASSYRPNQLLSLDHPVNGAAGSGGGYL 107

Query: 174 LGPQD---VGRPVDFVXXXXXXXXXXRTYFATSNDNLVNRLYRGSKAVEPGSANSPRCQA 4
           L P+    V R VDFV           TYF+++ D  VNRLYR S+  EPGSANSPRCQA
Sbjct: 108 LVPKSEEAVSRSVDFVSRLGLNLGGR-TYFSSAEDEFVNRLYRRSRPTEPGSANSPRCQA 166

Query: 3   K 1
           +
Sbjct: 167 E 167


>ref|XP_003626693.1| Squamosa promoter binding protein [Medicago truncatula]
           gi|355520715|gb|AET01169.1| Squamosa promoter binding
           protein [Medicago truncatula]
          Length = 327

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 41/113 (36%), Positives = 48/113 (42%), Gaps = 11/113 (9%)
 Frame = -2

Query: 306 HNHHNHVFDTRAFTGAXXXXXXXXXXXXXXXXXXXXPVNASHCGLGP--------QDVGR 151
           HN H   FD RAF G                            G  P        +DV R
Sbjct: 79  HNIHQSFFDPRAFHGGSSTASSYPPPQPQPPPSMLSLDPLPGHGHSPGFLLVPKSEDVNR 138

Query: 150 PVDFVXXXXXXXXXXRTYFATSNDNLVNRLYRGSKAVEP---GSANSPRCQAK 1
           P+DFV          RTYF+ S D+ V RLYR S+  EP   GS+NSPRCQA+
Sbjct: 139 PIDFVGSRLGLNLGGRTYFS-SEDDFVTRLYRRSRPPEPGSTGSSNSPRCQAE 190


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