BLASTX nr result
ID: Glycyrrhiza23_contig00033784
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00033784 (346 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003521087.1| PREDICTED: squamosa promoter-binding-like pr... 72 5e-11 ref|XP_003530168.1| PREDICTED: squamosa promoter-binding-like pr... 69 3e-10 gb|AFC17960.1| squamosa promoter binding protein-like 8 [Betula ... 59 4e-07 ref|XP_003626693.1| Squamosa promoter binding protein [Medicago ... 55 6e-06 >ref|XP_003521087.1| PREDICTED: squamosa promoter-binding-like protein 8-like [Glycine max] Length = 336 Score = 72.0 bits (175), Expect = 5e-11 Identities = 48/119 (40%), Positives = 60/119 (50%), Gaps = 16/119 (13%) Frame = -2 Query: 309 SHNHHNHVFDTRAFTGAXXXXXXXXXXXXXXXXXXXXPVNASHCGLGP------------ 166 +H+HH+ FD RAF GA VNA G GP Sbjct: 84 NHHHHHAFFDPRAFHGASNTSYPPPHSMLSLDPLPH--VNAVGPGHGPGSGPGGLLLVPK 141 Query: 165 -QDVGRPVDFVXXXXXXXXXXRTYFATSNDNLVNRLYRGSKAVEPG---SANSPRCQAK 1 +DVGRP+DFV RTYF++S D+ V+RLYR S+ VEPG S+NSPRCQA+ Sbjct: 142 SEDVGRPMDFVGSRIGLNLGGRTYFSSSEDDFVSRLYRRSRPVEPGSTASSNSPRCQAE 200 >ref|XP_003530168.1| PREDICTED: squamosa promoter-binding-like protein 8-like [Glycine max] Length = 338 Score = 69.3 bits (168), Expect = 3e-10 Identities = 45/120 (37%), Positives = 57/120 (47%), Gaps = 18/120 (15%) Frame = -2 Query: 306 HNHHNHVFDTRAFTGAXXXXXXXXXXXXXXXXXXXXPVNASHCGLGP------------- 166 H+HH+ FD RAF GA S G GP Sbjct: 83 HHHHHAFFDPRAFHGASNTSYPPPPSMLSLDPLPHVNAVGSGPGHGPGPGPGPGGLLLVP 142 Query: 165 --QDVGRPVDFVXXXXXXXXXXRTYFATSNDNLVNRLYRGSKAVEPG---SANSPRCQAK 1 ++VGRP+DFV RTYF++S D+ V+RLYR S+ VEPG S+NSPRCQA+ Sbjct: 143 KSEEVGRPMDFVGSRIGLNLGGRTYFSSSEDDFVSRLYRRSRPVEPGSTISSNSPRCQAE 202 >gb|AFC17960.1| squamosa promoter binding protein-like 8 [Betula platyphylla] Length = 309 Score = 58.9 bits (141), Expect = 4e-07 Identities = 43/121 (35%), Positives = 53/121 (43%), Gaps = 12/121 (9%) Frame = -2 Query: 327 PATTGFSHNH---------HNHVFDTRAFTGAXXXXXXXXXXXXXXXXXXXXPVNASHCG 175 PATT FSH + H+ FD RA+ + Sbjct: 48 PATTAFSHFNPPQQTHSQLHHSFFDPRAYPQPSASSYRPNQLLSLDHPVNGAAGSGGGYL 107 Query: 174 LGPQD---VGRPVDFVXXXXXXXXXXRTYFATSNDNLVNRLYRGSKAVEPGSANSPRCQA 4 L P+ V R VDFV TYF+++ D VNRLYR S+ EPGSANSPRCQA Sbjct: 108 LVPKSEEAVSRSVDFVSRLGLNLGGR-TYFSSAEDEFVNRLYRRSRPTEPGSANSPRCQA 166 Query: 3 K 1 + Sbjct: 167 E 167 >ref|XP_003626693.1| Squamosa promoter binding protein [Medicago truncatula] gi|355520715|gb|AET01169.1| Squamosa promoter binding protein [Medicago truncatula] Length = 327 Score = 55.1 bits (131), Expect = 6e-06 Identities = 41/113 (36%), Positives = 48/113 (42%), Gaps = 11/113 (9%) Frame = -2 Query: 306 HNHHNHVFDTRAFTGAXXXXXXXXXXXXXXXXXXXXPVNASHCGLGP--------QDVGR 151 HN H FD RAF G G P +DV R Sbjct: 79 HNIHQSFFDPRAFHGGSSTASSYPPPQPQPPPSMLSLDPLPGHGHSPGFLLVPKSEDVNR 138 Query: 150 PVDFVXXXXXXXXXXRTYFATSNDNLVNRLYRGSKAVEP---GSANSPRCQAK 1 P+DFV RTYF+ S D+ V RLYR S+ EP GS+NSPRCQA+ Sbjct: 139 PIDFVGSRLGLNLGGRTYFS-SEDDFVTRLYRRSRPPEPGSTGSSNSPRCQAE 190