BLASTX nr result

ID: Glycyrrhiza23_contig00033779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033779
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519572.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    79   4e-13
ref|XP_003544936.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    77   1e-12
ref|XP_003617524.1| ATP-dependent RNA helicase DBP4 [Medicago tr...    63   3e-08

>ref|XP_003519572.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Glycine
           max]
          Length = 746

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/47 (80%), Positives = 40/47 (85%)
 Frame = -1

Query: 324 IHRVGSTAYYKLDGKSVLLLLPSKIHMLEKLKVKKVPIHFNKPRKEL 184
           IHRVG TA YK DGKSVL LLPS+I MLEKLK  KVP+HFNKPRKEL
Sbjct: 399 IHRVGRTARYKSDGKSVLFLLPSEIQMLEKLKAAKVPVHFNKPRKEL 445


>ref|XP_003544936.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Glycine
           max]
          Length = 743

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/47 (78%), Positives = 40/47 (85%)
 Frame = -1

Query: 324 IHRVGSTAYYKLDGKSVLLLLPSKIHMLEKLKVKKVPIHFNKPRKEL 184
           IHRVG TA YK DGKSVL LLPS+I MLEKLK  KVP+HFNKPR+EL
Sbjct: 398 IHRVGRTARYKSDGKSVLFLLPSEIQMLEKLKAAKVPVHFNKPRQEL 444


>ref|XP_003617524.1| ATP-dependent RNA helicase DBP4 [Medicago truncatula]
           gi|355518859|gb|AET00483.1| ATP-dependent RNA helicase
           DBP4 [Medicago truncatula]
          Length = 747

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/47 (68%), Positives = 34/47 (72%)
 Frame = -1

Query: 324 IHRVGSTAYYKLDGKSVLLLLPSKIHMLEKLKVKKVPIHFNKPRKEL 184
           IHRVG TA Y   GKSVL LLPS+  M EKLK  KVP+H  KPRKEL
Sbjct: 408 IHRVGRTARYNSVGKSVLFLLPSETMMHEKLKAAKVPVHCQKPRKEL 454


Top