BLASTX nr result

ID: Glycyrrhiza23_contig00033730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033730
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317202.1| predicted protein [Populus trichocarpa] gi|2...    77   4e-12
ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...    72   1e-10
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    65   2e-08
ref|XP_003610665.1| F-box/LRR-repeat protein [Medicago truncatul...    62   1e-07
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    60   5e-07

>ref|XP_002317202.1| predicted protein [Populus trichocarpa] gi|222860267|gb|EEE97814.1|
           predicted protein [Populus trichocarpa]
          Length = 507

 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 59/162 (36%), Positives = 85/162 (52%)
 Frame = +2

Query: 113 EVAYRAYRHFWEIFCVEELILTPYVLELITYAKRLYASMPEFHKATCLGFHPPGKAINFG 292
           EVA+R ++   E   V+ L L+P  LE + YA+ L   +P F + T L      K+++  
Sbjct: 350 EVAHRLHKLIMECCNVKHLELSPDTLEALAYAEEL--DLPVFQRLTRLELKR--KSVDLS 405

Query: 293 CGTLAKFLQKFPCLEILTFQTGICLNENHEDGNWMLDPVPSCFSSHLKFIRICQFRGTFG 472
           C  L + LQK P L+ L F+ GI L++ H+  N+ LDP+P CF + LK I+I  F  T  
Sbjct: 406 CRALNRLLQKLPHLDCLDFRMGIFLSKKHK--NFALDPLPPCFLTQLKIIKIHTFSLTDE 463

Query: 473 ELQIVKSLLESAENLVQMDIICDHGRFSGYGLNHIQMLHRAS 598
           EL  V  L   +  L ++ I    GR +    N I ML R S
Sbjct: 464 ELHAVGILFRVSTVLEKVYI--SGGRLN---QNKISMLARES 500


>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 467

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 56/165 (33%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
 Frame = +2

Query: 83  DIGQSSIMNTE--VAYRAYRHFWEIFCVEELILTPYVLELITYAKRLYASMPEFHKATCL 256
           D+G   + N E  VA  A   F  +  VE L L+   ++ + YAK     +P F   T L
Sbjct: 274 DLGFFCVQNNELHVAVFAIELFSRLGSVESLRLSDQTIQCLNYAKSALHLLPSFKNLTRL 333

Query: 257 GFHPPGKAINFGCGTLAKFLQKFPCLEIL-----------TFQTGICLNENHEDGNWMLD 403
             H    +    C  LA  L+K P LE L            F +G  L+ + ED  W  D
Sbjct: 334 EVHFDDPS----CEVLADILRKSPKLEFLHIYGVHLVSCSRFSSGSYLSLDSED--WTSD 387

Query: 404 PVPSCFSSHLKFIRICQFRGTFGELQIVKSLLESAENLVQMDIIC 538
            +P CF S LK   I  FRG   E+++VK LLE+   L +M+I C
Sbjct: 388 SLPCCFKSSLKSCDISDFRGDEAEIRLVKFLLENVTLLREMNIYC 432


>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 58/198 (29%), Positives = 89/198 (44%), Gaps = 2/198 (1%)
 Frame = +2

Query: 5   GTFRNDYYIFQAESLVRESMGLLGTDDIGQSSIMNTEVAYRAYRHFWEIFCVEELILTPY 184
           GT  NDY ++++ S+V   + +    D  +      + AYRA +    I   + L LT  
Sbjct: 256 GTLSNDYCLYES-SVVETCISIFSAADKPR------QTAYRASKLLEGISSAQSLCLTTN 308

Query: 185 VLELITYAKRLYASMPEFHKATCLGFHPPGKAINFGCGTLAKFLQKFPCLEILTFQTGIC 364
           V++++  A  L A   EF   T L F    +  N         +   P L  L F  G+ 
Sbjct: 309 VVDVLDDAPELLAFPLEFRNLTSLLFE--SEESNLHSDGFWHIIYNSPHLIALQFY-GVS 365

Query: 365 LNENHED--GNWMLDPVPSCFSSHLKFIRICQFRGTFGELQIVKSLLESAENLVQMDIIC 538
           + +   +   +W LDP P CF S LKFI++ +F G   EL  V  LL++A  L  MDII 
Sbjct: 366 MPKVPSNCREDWTLDPSPPCFLSCLKFIQVGRFGGDEKELDAVGFLLKNATALESMDIIY 425

Query: 539 DHGRFSGYGLNHIQMLHR 592
                   G++    +H+
Sbjct: 426 SGSARRDQGVDKTNEIHQ 443


>ref|XP_003610665.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355512000|gb|AES93623.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 489

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 1/195 (0%)
 Frame = +2

Query: 5   GTFRNDYYIFQAESLVRESMGLLGTDDIGQSSIMNTEVAYRAYRHFWEIFCVEELILTPY 184
           G   NDY +F   S+   ++ L       +         +  Y+ F  +  V +L ++ +
Sbjct: 286 GDLMNDYSLFYTFSVSNATIKL------HEQHNNMLHAGHFIYKLFIALSGVTKLSVSDF 339

Query: 185 VLELITYAKRLYASMPEFHKATCLGFHPPGKAINFGCGTLAKFLQKFPCLEILTFQTGIC 364
            L+ +     L A +P F     L    P  A++  C  L   L+  P LE + F+ GI 
Sbjct: 340 ALQALCQPLLLAAHLPLFFNLVKLRVTSPS-AVDLSCEGLHSLLRNSPFLEKIEFKEGIT 398

Query: 365 LNENHEDGNWMLDPVPSCFSSHLKFIRICQFRGTFGELQIVKSLLESAENLVQMDIICDH 544
           L  N   G  +++P+P CF + LK I+I  F G+ GEL  +K LL+    L  + I  + 
Sbjct: 399 LAAN---GGNLINPLPGCFWTKLKVIKIYDFCGSDGELNAIKFLLQETLVLDTLYIQYNE 455

Query: 545 GRF-SGYGLNHIQML 586
             F S  G   + ML
Sbjct: 456 SHFDSPEGTKMLDML 470


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 59/181 (32%), Positives = 81/181 (44%), Gaps = 2/181 (1%)
 Frame = +2

Query: 2   TGTFRNDYYIFQAESLVRESMGLLGTDDIGQSSIMNTEVAYRA--YRHFWEIFCVEELIL 175
           T     DY++    SLV+  + +    +  + S  N  ++Y    Y     I  V+ L L
Sbjct: 252 TDYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPHNGGISYHGPIYELLGRISNVKCLSL 311

Query: 176 TPYVLELITYAKRLYASMPEFHKATCLGFHPPGKAINFGCGTLAKFLQKFPCLEILTFQT 355
           T   L+ ++     Y  +P FH  T L F   G    F    L  FL   P LE L  +T
Sbjct: 312 TGVTLDSLSGTIGDY-KLPTFHNMTRLEFLFIG---GFNWDFLPNFLHSSPNLEALVIET 367

Query: 356 GICLNENHEDGNWMLDPVPSCFSSHLKFIRICQFRGTFGELQIVKSLLESAENLVQMDII 535
           G   NE   +G  M   VP+C   HLK I I +  G   EL+ V+ LL++AE L QM I 
Sbjct: 368 GYT-NELIPEGWLMPLQVPACLVLHLKEIEIRRIVGEDYELEAVEYLLKNAEVLQQMTID 426

Query: 536 C 538
           C
Sbjct: 427 C 427


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