BLASTX nr result

ID: Glycyrrhiza23_contig00033709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033709
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628713.1| DNA-directed RNA polymerase [Medicago trunca...   136   2e-30
ref|XP_003531932.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   135   4e-30
ref|XP_003548663.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   134   6e-30
emb|CBI27412.3| unnamed protein product [Vitis vinifera]              128   5e-28
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   128   5e-28

>ref|XP_003628713.1| DNA-directed RNA polymerase [Medicago truncatula]
           gi|355522735|gb|AET03189.1| DNA-directed RNA polymerase
           [Medicago truncatula]
          Length = 727

 Score =  136 bits (343), Expect = 2e-30
 Identities = 66/69 (95%), Positives = 68/69 (98%)
 Frame = -3

Query: 208 VMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFAASCYAAKTTLTALEEMFEAARSIMS 29
           VMTSVYGVTY+GARDQIKRRLKERCA+EDDSELFAASCYAAKTTLTALEEMFEAARSIM 
Sbjct: 506 VMTSVYGVTYIGARDQIKRRLKERCAVEDDSELFAASCYAAKTTLTALEEMFEAARSIMG 565

Query: 28  WLGDCAKVI 2
           WLGDCAKVI
Sbjct: 566 WLGDCAKVI 574


>ref|XP_003531932.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
           [Glycine max]
          Length = 949

 Score =  135 bits (339), Expect = 4e-30
 Identities = 66/69 (95%), Positives = 68/69 (98%)
 Frame = -3

Query: 208 VMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFAASCYAAKTTLTALEEMFEAARSIMS 29
           VMTSVYGVTY+GARDQIKRRLKERCAIEDD ELFAASCYAA+TTLTALEEMFEAARSIMS
Sbjct: 728 VMTSVYGVTYIGARDQIKRRLKERCAIEDDVELFAASCYAARTTLTALEEMFEAARSIMS 787

Query: 28  WLGDCAKVI 2
           WLGDCAKVI
Sbjct: 788 WLGDCAKVI 796


>ref|XP_003548663.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
           [Glycine max]
          Length = 955

 Score =  134 bits (338), Expect = 6e-30
 Identities = 66/69 (95%), Positives = 67/69 (97%)
 Frame = -3

Query: 208 VMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFAASCYAAKTTLTALEEMFEAARSIMS 29
           VMTSVYGVTY+GARDQIKRRLKERCAIEDD ELFAASCYAAKTTLTALEEMFEAARSIM 
Sbjct: 734 VMTSVYGVTYIGARDQIKRRLKERCAIEDDVELFAASCYAAKTTLTALEEMFEAARSIMG 793

Query: 28  WLGDCAKVI 2
           WLGDCAKVI
Sbjct: 794 WLGDCAKVI 802


>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score =  128 bits (321), Expect = 5e-28
 Identities = 62/69 (89%), Positives = 66/69 (95%)
 Frame = -3

Query: 208 VMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFAASCYAAKTTLTALEEMFEAARSIMS 29
           VMTSVYGVTY+GARDQIKRRLKERCAI D+ E+F+ASCYAAKTTLTAL EMFEAARSIMS
Sbjct: 589 VMTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMS 648

Query: 28  WLGDCAKVI 2
           WLGDCAKVI
Sbjct: 649 WLGDCAKVI 657


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
           vinifera]
          Length = 978

 Score =  128 bits (321), Expect = 5e-28
 Identities = 62/69 (89%), Positives = 66/69 (95%)
 Frame = -3

Query: 208 VMTSVYGVTYVGARDQIKRRLKERCAIEDDSELFAASCYAAKTTLTALEEMFEAARSIMS 29
           VMTSVYGVTY+GARDQIKRRLKERCAI D+ E+F+ASCYAAKTTLTAL EMFEAARSIMS
Sbjct: 757 VMTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMS 816

Query: 28  WLGDCAKVI 2
           WLGDCAKVI
Sbjct: 817 WLGDCAKVI 825