BLASTX nr result

ID: Glycyrrhiza23_contig00033673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033673
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534838.1| PREDICTED: condensin-2 complex subunit H2-li...   147   7e-34
ref|XP_003547386.1| PREDICTED: uncharacterized protein LOC100786...   145   3e-33
emb|CBI22967.3| unnamed protein product [Vitis vinifera]              110   9e-23
ref|XP_002270818.1| PREDICTED: condensin-2 complex subunit H2-li...   110   9e-23
ref|XP_002328598.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22

>ref|XP_003534838.1| PREDICTED: condensin-2 complex subunit H2-like [Glycine max]
          Length = 673

 Score =  147 bits (372), Expect = 7e-34
 Identities = 72/90 (80%), Positives = 75/90 (83%)
 Frame = -2

Query: 271 PWKPLNPHEPGNLRVKPFRKVKALKKIGINVSHRVSMNTFFPLAKLHGPISPELMETWEM 92
           PWKPLNPHEPGNLRVKPFRKV  LKK  INV   VSMNT FPLAKL GPISPELME WEM
Sbjct: 302 PWKPLNPHEPGNLRVKPFRKVNTLKKNSINVRLPVSMNTLFPLAKLRGPISPELMEMWEM 361

Query: 91  RHGAHQRHRDSQSTPPLYEKLRQSLINEGN 2
           RH  H+R RDSQ+  PLYEKLRQSL+NEGN
Sbjct: 362 RHLVHERQRDSQA--PLYEKLRQSLVNEGN 389


>ref|XP_003547386.1| PREDICTED: uncharacterized protein LOC100786571 [Glycine max]
          Length = 674

 Score =  145 bits (367), Expect = 3e-33
 Identities = 70/90 (77%), Positives = 74/90 (82%)
 Frame = -2

Query: 271 PWKPLNPHEPGNLRVKPFRKVKALKKIGINVSHRVSMNTFFPLAKLHGPISPELMETWEM 92
           PWKPLNPHEPGNLRVKPFRK+  LKK  INV   VSMNT FPLAKLHGPISPELME WEM
Sbjct: 303 PWKPLNPHEPGNLRVKPFRKLNTLKKNSINVRQPVSMNTLFPLAKLHGPISPELMEMWEM 362

Query: 91  RHGAHQRHRDSQSTPPLYEKLRQSLINEGN 2
           RH  H+R RDS +   LYEKLRQSL+NEGN
Sbjct: 363 RHHVHERQRDSLAL--LYEKLRQSLVNEGN 390


>emb|CBI22967.3| unnamed protein product [Vitis vinifera]
          Length = 1281

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/87 (62%), Positives = 67/87 (77%)
 Frame = -2

Query: 271  PWKPLNPHEPGNLRVKPFRKVKALKKIGINVSHRVSMNTFFPLAKLHGPISPELMETWEM 92
            PWKPLNPHE GNL+VKPF+KVKA ++ G+  +    + T FPLAK+HGPISPEL E WE 
Sbjct: 902  PWKPLNPHEAGNLKVKPFKKVKAFRRHGVCSTKHNILTTQFPLAKMHGPISPELTEIWE- 960

Query: 91   RHGAHQRHRDSQSTPPLYEKLRQSLIN 11
            +H A +R ++ Q TPPLYEKLR SLI+
Sbjct: 961  KHRACERQQEPQ-TPPLYEKLRNSLIH 986


>ref|XP_002270818.1| PREDICTED: condensin-2 complex subunit H2-like [Vitis vinifera]
          Length = 666

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/87 (62%), Positives = 67/87 (77%)
 Frame = -2

Query: 271 PWKPLNPHEPGNLRVKPFRKVKALKKIGINVSHRVSMNTFFPLAKLHGPISPELMETWEM 92
           PWKPLNPHE GNL+VKPF+KVKA ++ G+  +    + T FPLAK+HGPISPEL E WE 
Sbjct: 302 PWKPLNPHEAGNLKVKPFKKVKAFRRHGVCSTKHNILTTQFPLAKMHGPISPELTEIWE- 360

Query: 91  RHGAHQRHRDSQSTPPLYEKLRQSLIN 11
           +H A +R ++ Q TPPLYEKLR SLI+
Sbjct: 361 KHRACERQQEPQ-TPPLYEKLRNSLIH 386


>ref|XP_002328598.1| predicted protein [Populus trichocarpa] gi|222838580|gb|EEE76945.1|
           predicted protein [Populus trichocarpa]
          Length = 645

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/90 (56%), Positives = 66/90 (73%)
 Frame = -2

Query: 271 PWKPLNPHEPGNLRVKPFRKVKALKKIGINVSHRVSMNTFFPLAKLHGPISPELMETWEM 92
           PWKPLNPHEPGNL+VKPF KVKA ++ G   + + S+ T FP A++HGP+S +L E WE 
Sbjct: 300 PWKPLNPHEPGNLKVKPFEKVKAFRRNGKKSAKQASITTLFPPARMHGPVSLDLTEMWEA 359

Query: 91  RHGAHQRHRDSQSTPPLYEKLRQSLINEGN 2
           R     +HR++Q T PLY KLR+SL NEG+
Sbjct: 360 RQNELGKHRNTQPT-PLYVKLRKSLTNEGH 388


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