BLASTX nr result

ID: Glycyrrhiza23_contig00033649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033649
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630084.1| RING finger family protein [Medicago truncat...   159   3e-37
gb|AFK35856.1| unknown [Lotus japonicus]                              129   3e-28
ref|XP_003602018.1| RING finger family protein [Medicago truncat...   115   5e-24
ref|XP_002309999.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22
ref|XP_002306334.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21

>ref|XP_003630084.1| RING finger family protein [Medicago truncatula]
           gi|355524106|gb|AET04560.1| RING finger family protein
           [Medicago truncatula]
          Length = 228

 Score =  159 bits (401), Expect = 3e-37
 Identities = 79/106 (74%), Positives = 86/106 (81%)
 Frame = +1

Query: 37  MTILSELLYQIYAKTIVLLTYMLIELILIIQYLKSEKRPITTTQYLSFIEEKNPTIHYTK 216
           MTILSELLYQ+Y KTIVL TYMLIELIL+I YLKS K PITTTQYL+FIEEKNPT    K
Sbjct: 1   MTILSELLYQLYVKTIVLFTYMLIELILVICYLKSTKNPITTTQYLNFIEEKNPTTRLKK 60

Query: 217 RLMNGNQQHYYIDCRVCLSEFEEGDKVRNLSCEHTFHRDCLDKWFL 354
                     +IDCRVCLSEFEEGD VR+L+CEHTFH+DCLDKWFL
Sbjct: 61  LAAE------HIDCRVCLSEFEEGDIVRSLNCEHTFHKDCLDKWFL 100


>gb|AFK35856.1| unknown [Lotus japonicus]
          Length = 164

 Score =  129 bits (323), Expect = 3e-28
 Identities = 61/108 (56%), Positives = 80/108 (74%), Gaps = 4/108 (3%)
 Frame = +1

Query: 37  MTILSELLYQIYAKTIVLLTYMLIELILIIQYLKSEKRPITTTQYLSFIEEKNPTIHYTK 216
           M  L++L  Q+ +K I+LLT +L+ELI+++  L SEKR ITT QYL FIEE NPTI Y K
Sbjct: 1   MKALTKLFQQLCSKIIILLTLLLVELIVLLWRLTSEKRSITTKQYLEFIEENNPTIRYAK 60

Query: 217 RLMNGNQQHYYI----DCRVCLSEFEEGDKVRNLSCEHTFHRDCLDKW 348
           R  + ++  + +    +CRVCLSEFEEG+KVR L C+HTFH+DCLDKW
Sbjct: 61  RRSSWSELEHVVPDDTECRVCLSEFEEGEKVRRLKCKHTFHKDCLDKW 108


>ref|XP_003602018.1| RING finger family protein [Medicago truncatula]
           gi|355491066|gb|AES72269.1| RING finger family protein
           [Medicago truncatula]
          Length = 157

 Score =  115 bits (287), Expect = 5e-24
 Identities = 56/105 (53%), Positives = 74/105 (70%), Gaps = 1/105 (0%)
 Frame = +1

Query: 37  MTI-LSELLYQIYAKTIVLLTYMLIELILIIQYLKSEKRPITTTQYLSFIEEKNPTIHYT 213
           MT+ +S +  ++  K  +LL ++L+ELI+ I  L S+ + ITT QY+ FIEEKNPTI Y 
Sbjct: 1   MTVDISNVFQKLCNKIAILLIFVLVELIIFIWKLTSDTQSITTRQYIKFIEEKNPTIRYN 60

Query: 214 KRLMNGNQQHYYIDCRVCLSEFEEGDKVRNLSCEHTFHRDCLDKW 348
           K+L +        DC VCLSEFEEG+KVR L C+HTFH+DCLDKW
Sbjct: 61  KKLNSHG------DCSVCLSEFEEGEKVRRLKCKHTFHKDCLDKW 99


>ref|XP_002309999.1| predicted protein [Populus trichocarpa] gi|222852902|gb|EEE90449.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/109 (48%), Positives = 75/109 (68%), Gaps = 5/109 (4%)
 Frame = +1

Query: 37  MTILSELLYQIYAKTIVLLTYMLIELILIIQY-----LKSEKRPITTTQYLSFIEEKNPT 201
           M  LSE    +Y  +IV L+ +L+E++++ Q      LKS K  I+TTQYL  +EEKNPT
Sbjct: 1   MASLSEFFSHLYTMSIVFLSLLLVEIVILFQSVIGSTLKSNKPIISTTQYLKHMEEKNPT 60

Query: 202 IHYTKRLMNGNQQHYYIDCRVCLSEFEEGDKVRNLSCEHTFHRDCLDKW 348
           I Y+++L    +Q   ++C VCLS+F EG+ VR L+C+HTFH+DCLDKW
Sbjct: 61  ISYSEKL---TRQQDSMECAVCLSKFSEGESVRKLNCKHTFHKDCLDKW 106


>ref|XP_002306334.1| predicted protein [Populus trichocarpa] gi|222855783|gb|EEE93330.1|
           predicted protein [Populus trichocarpa]
          Length = 149

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/94 (55%), Positives = 70/94 (74%), Gaps = 5/94 (5%)
 Frame = +1

Query: 82  IVLLTYMLIELILIIQY-----LKSEKRPITTTQYLSFIEEKNPTIHYTKRLMNGNQQHY 246
           IV L+ +L+E++++I+      LKS+K  I+TTQYL  IEEKNPTI Y+K+LM   +Q  
Sbjct: 3   IVFLSLLLLEIVILIRSVIGSTLKSDKPIISTTQYLRHIEEKNPTISYSKQLM---RQQD 59

Query: 247 YIDCRVCLSEFEEGDKVRNLSCEHTFHRDCLDKW 348
            I+C VCLSEF EG+ VR L C+HTFH+DCLD+W
Sbjct: 60  SIECAVCLSEFSEGESVRKLKCKHTFHKDCLDEW 93


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