BLASTX nr result

ID: Glycyrrhiza23_contig00033616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033616
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]       251   3e-65
ref|XP_003615478.1| MutS2 protein [Medicago truncatula] gi|35551...   246   1e-63
ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]    203   1e-50
emb|CBI23113.3| unnamed protein product [Vitis vinifera]              199   2e-49
ref|XP_004164874.1| PREDICTED: mutS2 protein-like [Cucumis sativus]   183   1e-44

>ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]
          Length = 792

 Score =  251 bits (642), Expect = 3e-65
 Identities = 127/177 (71%), Positives = 148/177 (83%), Gaps = 5/177 (2%)
 Frame = +2

Query: 5   MLSCTLAISVFPIITINKLRLRQRQ-----TVVAASIHDDSLRVLEWDKLCDLVSSFATT 169
           MLS  +    FP+I INK + R  Q       ++ASIH DSLRVLEWDKLCDLV+SFATT
Sbjct: 1   MLSFAITTHAFPVIAINKWKQRHMQRQMQRVSLSASIHHDSLRVLEWDKLCDLVASFATT 60

Query: 170 SLGRQSLKAQLWSLDRTYEESLKLLEETNAAVEMYKHGACRLQFGHLDALLVKSAIQNAQ 349
           SLGRQ+LK QLWSL++T+EESLKLLEETNAAVEM KHG  RL  GHLDA+LVK+AIQ+A+
Sbjct: 61  SLGRQALKDQLWSLNQTFEESLKLLEETNAAVEMNKHGTLRLHLGHLDAMLVKTAIQHAR 120

Query: 350 RSVPVTGYEARAILALLQCADTLQGDLKAAIKRDKDWYNRFMPLTEVIMELVVNRSL 520
           RS+PV+GYEARAI+ALLQCA+ +QGDLKA IK DKDW+NRFMPLTEVIME V+NRSL
Sbjct: 121 RSIPVSGYEARAIVALLQCAEIVQGDLKAVIKEDKDWHNRFMPLTEVIMEFVINRSL 177


>ref|XP_003615478.1| MutS2 protein [Medicago truncatula] gi|355516813|gb|AES98436.1|
           MutS2 protein [Medicago truncatula]
          Length = 574

 Score =  246 bits (628), Expect = 1e-63
 Identities = 123/156 (78%), Positives = 144/156 (92%), Gaps = 1/156 (0%)
 Frame = +2

Query: 56  KLRLRQRQTV-VAASIHDDSLRVLEWDKLCDLVSSFATTSLGRQSLKAQLWSLDRTYEES 232
           KL+L+ RQTV VAASIH DSLRVLEWDKL DLVSSFATTSLGR +LK QLWS ++TYEES
Sbjct: 29  KLKLKHRQTVSVAASIHHDSLRVLEWDKLSDLVSSFATTSLGRHALKDQLWSQNQTYEES 88

Query: 233 LKLLEETNAAVEMYKHGACRLQFGHLDALLVKSAIQNAQRSVPVTGYEARAILALLQCAD 412
           LKLLEETNAAVEM+KHG+CRL FGH+DA+LV++AIQ+A+R++ VTGYEA A+L+LLQ AD
Sbjct: 89  LKLLEETNAAVEMHKHGSCRLHFGHIDAMLVQTAIQSARRTILVTGYEANAVLSLLQSAD 148

Query: 413 TLQGDLKAAIKRDKDWYNRFMPLTEVIMELVVNRSL 520
           TLQGDLKA IK+DKDWY+RFMPLTEVIM+LV+NRSL
Sbjct: 149 TLQGDLKATIKQDKDWYSRFMPLTEVIMDLVINRSL 184


>ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]
          Length = 791

 Score =  203 bits (516), Expect = 1e-50
 Identities = 107/180 (59%), Positives = 136/180 (75%), Gaps = 8/180 (4%)
 Frame = +2

Query: 5   MLSCTLAISVFPIITI--------NKLRLRQRQTVVAASIHDDSLRVLEWDKLCDLVSSF 160
           M SC    S+F I+++        N   L+Q Q     S+H  +LRVLEWDKLC  VSSF
Sbjct: 1   MNSCACGKSIFMIVSVASTPERFKNGGILKQSQK---PSVHHQTLRVLEWDKLCHSVSSF 57

Query: 161 ATTSLGRQSLKAQLWSLDRTYEESLKLLEETNAAVEMYKHGACRLQFGHLDALLVKSAIQ 340
           A+TSLGR+S  AQLWSLD+TY+ESL+LL+ETNAA+E++KHG C + F  +DA+LVKSAIQ
Sbjct: 58  ASTSLGRESTWAQLWSLDQTYQESLRLLDETNAALEIHKHGGCTMDFSTIDAVLVKSAIQ 117

Query: 341 NAQRSVPVTGYEARAILALLQCADTLQGDLKAAIKRDKDWYNRFMPLTEVIMELVVNRSL 520
           +A+R +PV G EA A++ALLQ A+TLQ +LKAAIK D DWY RFMP++EVIM LV+NRSL
Sbjct: 118 HARRMLPVDGNEAMAVVALLQLAETLQLNLKAAIKEDADWYKRFMPISEVIMGLVINRSL 177


>emb|CBI23113.3| unnamed protein product [Vitis vinifera]
          Length = 807

 Score =  199 bits (506), Expect = 2e-49
 Identities = 97/142 (68%), Positives = 121/142 (85%)
 Frame = +2

Query: 95  SIHDDSLRVLEWDKLCDLVSSFATTSLGRQSLKAQLWSLDRTYEESLKLLEETNAAVEMY 274
           S+H  +LRVLEWDKLC  VSSFA+TSLGR+S  AQLWSLD+TY+ESL+LL+ETNAA+E++
Sbjct: 25  SVHHQTLRVLEWDKLCHSVSSFASTSLGRESTWAQLWSLDQTYQESLRLLDETNAALEIH 84

Query: 275 KHGACRLQFGHLDALLVKSAIQNAQRSVPVTGYEARAILALLQCADTLQGDLKAAIKRDK 454
           KHG C + F  +DA+LVKSAIQ+A+R +PV G EA A++ALLQ A+TLQ +LKAAIK D 
Sbjct: 85  KHGGCTMDFSTIDAVLVKSAIQHARRMLPVDGNEAMAVVALLQLAETLQLNLKAAIKEDA 144

Query: 455 DWYNRFMPLTEVIMELVVNRSL 520
           DWY RFMP++EVIM LV+NRSL
Sbjct: 145 DWYKRFMPISEVIMGLVINRSL 166


>ref|XP_004164874.1| PREDICTED: mutS2 protein-like [Cucumis sativus]
          Length = 666

 Score =  183 bits (464), Expect = 1e-44
 Identities = 97/149 (65%), Positives = 113/149 (75%)
 Frame = +2

Query: 74  RQTVVAASIHDDSLRVLEWDKLCDLVSSFATTSLGRQSLKAQLWSLDRTYEESLKLLEET 253
           R      SI  DSLR LEWDKLCD V+SFA TSLGRQ++KAQLWS + TYEESL+LL+ET
Sbjct: 49  RDNTTQHSIRLDSLRALEWDKLCDSVASFARTSLGRQAIKAQLWSSNWTYEESLRLLDET 108

Query: 254 NAAVEMYKHGACRLQFGHLDALLVKSAIQNAQRSVPVTGYEARAILALLQCADTLQGDLK 433
           NAAVEM+KHG C L    ++  LVKSAI++AQRS+ + G EA AI ALLQ AD LQ +LK
Sbjct: 109 NAAVEMHKHGGCSLDLSGVNLHLVKSAIEHAQRSLAMDGNEAIAIAALLQFADMLQFNLK 168

Query: 434 AAIKRDKDWYNRFMPLTEVIMELVVNRSL 520
            AIK D DW  RFMPLT VIM +VVN+SL
Sbjct: 169 TAIKEDVDWSTRFMPLTNVIMGMVVNQSL 197


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