BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033597
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringsp...    77   1e-12
ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot viru...    71   8e-11

>gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringspot virus satellite
           RNA]
          Length = 287

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 49/98 (50%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
 Frame = +2

Query: 5   SLVAPIKSKITYADVVRAK--VSPAKAKKGVVTLIETSRDFKLFED---LPEPVAIPGQT 169
           ++ API  K +YAD +R+   V P+  +KGVVTL+ET +DF LF D     + V  PGQT
Sbjct: 101 AVAAPINPKKSYADALRSSAFVKPS-VRKGVVTLVETEKDFALFGDEFTQNQVVPCPGQT 159

Query: 170 PQEAASLSREFAKRALVFSGRRLMPVGLTEDHSTDPFA 283
             EA +L REF KR L FSGRRL   GL     +DPFA
Sbjct: 160 LPEAEALQREFHKRTLAFSGRRLSVSGLPS--GSDPFA 195


>ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot virus satellite RNA]
           gi|478364|pir||JQ2018 hypothetical 36.5K protein -
           strawberry latent ringspot virus
           gi|312511|emb|CAA49480.1| 36 kDa protein [Strawberry
           latent ringspot virus satellite RNA]
          Length = 331

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 47/89 (52%), Positives = 56/89 (62%), Gaps = 6/89 (6%)
 Frame = +2

Query: 11  VAPIK-SKITYADVVRAK--VSPAKAKKGVVTLIETSRDFKLFED---LPEPVAIPGQTP 172
           VAP    K +YAD +R+   V P+ A+KGVVTL+ET +DF LF D     + V  PGQT 
Sbjct: 102 VAPFNPKKKSYADALRSSAFVKPS-ARKGVVTLVETEKDFALFCDEFTQNQVVPCPGQTL 160

Query: 173 QEAASLSREFAKRALVFSGRRLMPVGLTE 259
            EA SL REF KRA  FSG+RL   GL E
Sbjct: 161 SEAESLQREFHKRAFAFSGKRLSVSGLPE 189