BLASTX nr result

ID: Glycyrrhiza23_contig00033596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033596
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606129.1| Bifunctional polymyxin resistance arnA prote...   210   1e-52
ref|XP_003538124.1| PREDICTED: bifunctional polymyxin resistance...   203   1e-50
ref|XP_003540793.1| PREDICTED: bifunctional polymyxin resistance...   197   6e-49
ref|XP_002274631.2| PREDICTED: bifunctional polymyxin resistance...   191   5e-47
emb|CBI28341.3| unnamed protein product [Vitis vinifera]              191   5e-47

>ref|XP_003606129.1| Bifunctional polymyxin resistance arnA protein [Medicago
           truncatula] gi|355507184|gb|AES88326.1| Bifunctional
           polymyxin resistance arnA protein [Medicago truncatula]
          Length = 381

 Score =  210 bits (534), Expect = 1e-52
 Identities = 99/108 (91%), Positives = 106/108 (98%)
 Frame = -3

Query: 325 TSHKAIVVDVSSDKINHLLDKALPWAHRIEFHHMNIKNDSRLETLVKASDLTINLAAICT 146
           TSHKAIV+DVSS+K+NHLLDK+ PWA+RIEFH MNIKNDSRLETLVKASDLTINLAAICT
Sbjct: 37  TSHKAIVIDVSSEKVNHLLDKSHPWANRIEFHQMNIKNDSRLETLVKASDLTINLAAICT 96

Query: 145 PADYNTRPLDTIYSNFLDAIPVVKFCTENNKRLIHFSTCEVFGKTIGS 2
           PADYNTRPLDTIYSNF+DAIPV+KFCTENNKRLIHFSTCEVFGKTIGS
Sbjct: 97  PADYNTRPLDTIYSNFIDAIPVIKFCTENNKRLIHFSTCEVFGKTIGS 144


>ref|XP_003538124.1| PREDICTED: bifunctional polymyxin resistance protein ArnA-like
           [Glycine max]
          Length = 381

 Score =  203 bits (517), Expect = 1e-50
 Identities = 93/108 (86%), Positives = 106/108 (98%)
 Frame = -3

Query: 325 TSHKAIVVDVSSDKINHLLDKALPWAHRIEFHHMNIKNDSRLETLVKASDLTINLAAICT 146
           T+HKA+VVDVSS+KINHLLD++LPWAHRIEFH MNIK+DSRLETLV+ +DLTINLAAICT
Sbjct: 37  TNHKAVVVDVSSEKINHLLDRSLPWAHRIEFHQMNIKSDSRLETLVQTTDLTINLAAICT 96

Query: 145 PADYNTRPLDTIYSNFLDAIPVVKFCTENNKRLIHFSTCEVFGKTIGS 2
           PADYNTRPLDTI+SNF+DAIPV+K+CTENNKRLIHFSTCEV+GKTIGS
Sbjct: 97  PADYNTRPLDTIFSNFIDAIPVIKYCTENNKRLIHFSTCEVYGKTIGS 144


>ref|XP_003540793.1| PREDICTED: bifunctional polymyxin resistance protein ArnA-like
           [Glycine max]
          Length = 381

 Score =  197 bits (502), Expect = 6e-49
 Identities = 91/108 (84%), Positives = 104/108 (96%)
 Frame = -3

Query: 325 TSHKAIVVDVSSDKINHLLDKALPWAHRIEFHHMNIKNDSRLETLVKASDLTINLAAICT 146
           T+HKA+VVDVSS+KINHLLD++LPWAHRIEFH MNIK+DSRLETLV+ +DLTINLAAI T
Sbjct: 37  TNHKAVVVDVSSEKINHLLDRSLPWAHRIEFHQMNIKSDSRLETLVQTTDLTINLAAIYT 96

Query: 145 PADYNTRPLDTIYSNFLDAIPVVKFCTENNKRLIHFSTCEVFGKTIGS 2
           PADYNTRPLDTI+ NF+DAIPV+K+CTENNKRLIHFSTCEV+GKTIGS
Sbjct: 97  PADYNTRPLDTIFGNFIDAIPVIKYCTENNKRLIHFSTCEVYGKTIGS 144


>ref|XP_002274631.2| PREDICTED: bifunctional polymyxin resistance protein ArnA [Vitis
           vinifera]
          Length = 433

 Score =  191 bits (485), Expect = 5e-47
 Identities = 90/108 (83%), Positives = 101/108 (93%)
 Frame = -3

Query: 325 TSHKAIVVDVSSDKINHLLDKALPWAHRIEFHHMNIKNDSRLETLVKASDLTINLAAICT 146
           T H AIV+DVSSDKI  LL+K+  W++RIEFH +NIKNDSRLETL+K+SDLTINLAAICT
Sbjct: 88  THHSAIVIDVSSDKITRLLEKSCSWSNRIEFHKINIKNDSRLETLIKSSDLTINLAAICT 147

Query: 145 PADYNTRPLDTIYSNFLDAIPVVKFCTENNKRLIHFSTCEVFGKTIGS 2
           PADYNTRPLDTIYSNFLDAIPVVK+CTE+NKRLIHFSTCEV+GKTIGS
Sbjct: 148 PADYNTRPLDTIYSNFLDAIPVVKYCTESNKRLIHFSTCEVYGKTIGS 195


>emb|CBI28341.3| unnamed protein product [Vitis vinifera]
          Length = 382

 Score =  191 bits (485), Expect = 5e-47
 Identities = 90/108 (83%), Positives = 101/108 (93%)
 Frame = -3

Query: 325 TSHKAIVVDVSSDKINHLLDKALPWAHRIEFHHMNIKNDSRLETLVKASDLTINLAAICT 146
           T H AIV+DVSSDKI  LL+K+  W++RIEFH +NIKNDSRLETL+K+SDLTINLAAICT
Sbjct: 37  THHSAIVIDVSSDKITRLLEKSCSWSNRIEFHKINIKNDSRLETLIKSSDLTINLAAICT 96

Query: 145 PADYNTRPLDTIYSNFLDAIPVVKFCTENNKRLIHFSTCEVFGKTIGS 2
           PADYNTRPLDTIYSNFLDAIPVVK+CTE+NKRLIHFSTCEV+GKTIGS
Sbjct: 97  PADYNTRPLDTIYSNFLDAIPVVKYCTESNKRLIHFSTCEVYGKTIGS 144


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