BLASTX nr result

ID: Glycyrrhiza23_contig00033573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033573
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32524.3| unnamed protein product [Vitis vinifera]               94   2e-17
ref|XP_002281238.1| PREDICTED: vegetative incompatibility protei...    94   2e-17
ref|XP_002510317.1| F-box and wd40 domain protein, putative [Ric...    92   5e-17
ref|XP_002326910.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_004163628.1| PREDICTED: uncharacterized WD repeat-contain...    82   4e-14

>emb|CBI32524.3| unnamed protein product [Vitis vinifera]
          Length = 429

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 43/60 (71%), Positives = 51/60 (85%)
 Frame = -1

Query: 547 CLSVLTGHTGPVKCIAVEEEENDQQQKKSDPRWIVYSGSLDKSVKVWRVSEHAPELRMLQ 368
           CLSVLTGHTGPVKC+AVEE   DQ+  K D RWIVYSGSLDKSVK+WRVSE AP+++ ++
Sbjct: 357 CLSVLTGHTGPVKCLAVEE---DQESTKRDQRWIVYSGSLDKSVKIWRVSEQAPDIQQMR 413


>ref|XP_002281238.1| PREDICTED: vegetative incompatibility protein HET-E-1-like [Vitis
           vinifera]
          Length = 445

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 43/60 (71%), Positives = 51/60 (85%)
 Frame = -1

Query: 547 CLSVLTGHTGPVKCIAVEEEENDQQQKKSDPRWIVYSGSLDKSVKVWRVSEHAPELRMLQ 368
           CLSVLTGHTGPVKC+AVEE   DQ+  K D RWIVYSGSLDKSVK+WRVSE AP+++ ++
Sbjct: 373 CLSVLTGHTGPVKCLAVEE---DQESTKRDQRWIVYSGSLDKSVKIWRVSEQAPDIQQMR 429


>ref|XP_002510317.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223551018|gb|EEF52504.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 470

 Score = 92.0 bits (227), Expect = 5e-17
 Identities = 50/87 (57%), Positives = 59/87 (67%), Gaps = 7/87 (8%)
 Frame = -1

Query: 547 CLSVLTGHTGPVKCIAVEEEENDQQQKKSDPRWIVYSGSLDKSVKVWRVSEHAPELRML- 371
           CLSVLTGHTGPVKC+AVEE+   +Q K  D RW+VYSGSLDKSVKVW VSE AP++  + 
Sbjct: 383 CLSVLTGHTGPVKCLAVEEDR--EQSKPGDQRWVVYSGSLDKSVKVWSVSELAPDVNQVA 440

Query: 370 -----QGWAATPSRGG-ATHDKSPTRG 308
                Q +A  P RG  AT + S   G
Sbjct: 441 MMQQQQHYAMQPDRGDPATSEDSSRAG 467


>ref|XP_002326910.1| predicted protein [Populus trichocarpa] gi|222835225|gb|EEE73660.1|
           predicted protein [Populus trichocarpa]
          Length = 448

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 43/83 (51%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
 Frame = -1

Query: 547 CLSVLTGHTGPVKCIAVEEEENDQQQKKSDPRWIVYSGSLDKSVKVWRVSEHAP---ELR 377
           C+SVLTGH GPVKC+AVEE+   ++ K  D RW+VYSGSLDKSVKVW V+E AP   ++ 
Sbjct: 367 CMSVLTGHNGPVKCLAVEEDH--EKSKDGDQRWVVYSGSLDKSVKVWSVAEMAPDMYQMA 424

Query: 376 MLQGWAATPSRGGATHDKSPTRG 308
           M+Q         G+  D  P+ G
Sbjct: 425 MMQQQQQYQRHMGSDADSLPSDG 447


>ref|XP_004163628.1| PREDICTED: uncharacterized WD repeat-containing protein
           alr3466-like [Cucumis sativus]
          Length = 412

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 46/86 (53%), Positives = 57/86 (66%)
 Frame = -1

Query: 547 CLSVLTGHTGPVKCIAVEEEENDQQQKKSDPRWIVYSGSLDKSVKVWRVSEHAPELRMLQ 368
           CLSVLTGHTGPVKC+AVE+   D +  + + RWIVYSGSLDKSVK+WRVSE  P      
Sbjct: 331 CLSVLTGHTGPVKCLAVEK---DNEVSEGERRWIVYSGSLDKSVKMWRVSEQPPST---- 383

Query: 367 GWAATPSRGGATHDKSPTRGLNYSSP 290
            +  +PS      + SPT GL  ++P
Sbjct: 384 -FQRSPS---FIPECSPTAGLLVNAP 405


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