BLASTX nr result

ID: Glycyrrhiza23_contig00033536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033536
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containi...    80   1e-13
ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containi...    80   1e-13
ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    73   2e-11
ref|XP_003528673.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    70   2e-10
emb|CBI16128.3| unnamed protein product [Vitis vinifera]               62   6e-08

>ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/54 (75%), Positives = 45/54 (83%)
 Frame = -1

Query: 167 MSSSYEVLILIQKMVKVPPEKAFSFFISSTCQGLQHTSQSMSFILNHLLSSGML 6
           MS S+E LILIQKMVKVPP KA   F ++T QGLQHTS S+SFILNHLLSSGML
Sbjct: 1   MSQSHEALILIQKMVKVPPTKALLLFNTATYQGLQHTSHSISFILNHLLSSGML 54


>ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/54 (75%), Positives = 45/54 (83%)
 Frame = -1

Query: 167 MSSSYEVLILIQKMVKVPPEKAFSFFISSTCQGLQHTSQSMSFILNHLLSSGML 6
           MS S+E LILIQKMVKVPP KA   F ++T QGLQHTS S+SFILNHLLSSGML
Sbjct: 1   MSQSHEALILIQKMVKVPPTKALLLFNTATYQGLQHTSHSISFILNHLLSSGML 54


>ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/54 (68%), Positives = 43/54 (79%)
 Frame = -1

Query: 167 MSSSYEVLILIQKMVKVPPEKAFSFFISSTCQGLQHTSQSMSFILNHLLSSGML 6
           MS S++ LILIQKMVKVPP K    F +++ QGL HTS S+SFILNHLLSSGML
Sbjct: 1   MSQSHKALILIQKMVKVPPIKTLLLFNTASYQGLHHTSHSISFILNHLLSSGML 54


>ref|XP_003528673.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 585

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/54 (68%), Positives = 41/54 (75%)
 Frame = -1

Query: 167 MSSSYEVLILIQKMVKVPPEKAFSFFISSTCQGLQHTSQSMSFILNHLLSSGML 6
           MS S+E LILIQKMVKVPP KA   F ++T QGL HT  S+SFILN LLSS ML
Sbjct: 1   MSQSHEALILIQKMVKVPPPKALLLFNTATYQGLHHTPHSISFILNLLLSSDML 54


>emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/55 (56%), Positives = 39/55 (70%)
 Frame = -1

Query: 167 MSSSYEVLILIQKMVKVPPEKAFSFFISSTCQGLQHTSQSMSFILNHLLSSGMLS 3
           M+ + + LIL+ KMVK PP KA S F SS  QG QHT QS+SFIL+ L+SS + S
Sbjct: 1   MAQTQQALILLPKMVKSPPLKALSLFTSSALQGFQHTHQSISFILHLLISSNLFS 55


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