BLASTX nr result
ID: Glycyrrhiza23_contig00033536
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00033536 (374 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containi... 80 1e-13 ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containi... 80 1e-13 ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 73 2e-11 ref|XP_003528673.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 70 2e-10 emb|CBI16128.3| unnamed protein product [Vitis vinifera] 62 6e-08 >ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690-like [Glycine max] Length = 556 Score = 80.5 bits (197), Expect = 1e-13 Identities = 41/54 (75%), Positives = 45/54 (83%) Frame = -1 Query: 167 MSSSYEVLILIQKMVKVPPEKAFSFFISSTCQGLQHTSQSMSFILNHLLSSGML 6 MS S+E LILIQKMVKVPP KA F ++T QGLQHTS S+SFILNHLLSSGML Sbjct: 1 MSQSHEALILIQKMVKVPPTKALLLFNTATYQGLQHTSHSISFILNHLLSSGML 54 >ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein At4g11690-like [Glycine max] Length = 556 Score = 80.5 bits (197), Expect = 1e-13 Identities = 41/54 (75%), Positives = 45/54 (83%) Frame = -1 Query: 167 MSSSYEVLILIQKMVKVPPEKAFSFFISSTCQGLQHTSQSMSFILNHLLSSGML 6 MS S+E LILIQKMVKVPP KA F ++T QGLQHTS S+SFILNHLLSSGML Sbjct: 1 MSQSHEALILIQKMVKVPPTKALLLFNTATYQGLQHTSHSISFILNHLLSSGML 54 >ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g11690-like [Glycine max] Length = 556 Score = 73.2 bits (178), Expect = 2e-11 Identities = 37/54 (68%), Positives = 43/54 (79%) Frame = -1 Query: 167 MSSSYEVLILIQKMVKVPPEKAFSFFISSTCQGLQHTSQSMSFILNHLLSSGML 6 MS S++ LILIQKMVKVPP K F +++ QGL HTS S+SFILNHLLSSGML Sbjct: 1 MSQSHKALILIQKMVKVPPIKTLLLFNTASYQGLHHTSHSISFILNHLLSSGML 54 >ref|XP_003528673.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g11690-like [Glycine max] Length = 585 Score = 69.7 bits (169), Expect = 2e-10 Identities = 37/54 (68%), Positives = 41/54 (75%) Frame = -1 Query: 167 MSSSYEVLILIQKMVKVPPEKAFSFFISSTCQGLQHTSQSMSFILNHLLSSGML 6 MS S+E LILIQKMVKVPP KA F ++T QGL HT S+SFILN LLSS ML Sbjct: 1 MSQSHEALILIQKMVKVPPPKALLLFNTATYQGLHHTPHSISFILNLLLSSDML 54 >emb|CBI16128.3| unnamed protein product [Vitis vinifera] Length = 563 Score = 61.6 bits (148), Expect = 6e-08 Identities = 31/55 (56%), Positives = 39/55 (70%) Frame = -1 Query: 167 MSSSYEVLILIQKMVKVPPEKAFSFFISSTCQGLQHTSQSMSFILNHLLSSGMLS 3 M+ + + LIL+ KMVK PP KA S F SS QG QHT QS+SFIL+ L+SS + S Sbjct: 1 MAQTQQALILLPKMVKSPPLKALSLFTSSALQGFQHTHQSISFILHLLISSNLFS 55