BLASTX nr result

ID: Glycyrrhiza23_contig00033518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033518
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532448.1| PREDICTED: WD repeat-containing protein 44-l...   201   5e-50
ref|XP_003525326.1| PREDICTED: WD repeat-containing protein YMR1...   196   2e-48
ref|XP_002518879.1| WD-repeat protein, putative [Ricinus communi...   114   1e-23
ref|XP_004143851.1| PREDICTED: uncharacterized protein LOC101204...   103   1e-20
ref|XP_002263491.2| PREDICTED: uncharacterized protein LOC100249...    95   5e-18

>ref|XP_003532448.1| PREDICTED: WD repeat-containing protein 44-like [Glycine max]
          Length = 745

 Score =  201 bits (511), Expect = 5e-50
 Identities = 105/146 (71%), Positives = 122/146 (83%), Gaps = 1/146 (0%)
 Frame = -2

Query: 435 YVTRHQVWTNNLQSVHLRRLNFIRWMGLESDTDANSIEGEGLGDPSCGVDRVTTTSGAVL 256
           +VTR+QVW  NL+SVH RRLNF+RWMGLESD +  S++GE LGD  CG+DR+T TSGAVL
Sbjct: 64  HVTRYQVWAQNLESVHQRRLNFLRWMGLESDLNY-SMKGEELGDQPCGIDRITATSGAVL 122

Query: 255 RNSVAAE-GIPLTSDQIVLDSLSNEASSSLQNRGDRENLACMIRNLDDGTQYVVDKLDQD 79
           R S A E G+P TS+QIVLDSLS+EAS S +NR   ENLACMIRNLDDGT+Y+VDKL QD
Sbjct: 123 RTSFAIEEGLPSTSNQIVLDSLSDEASGSQENR---ENLACMIRNLDDGTEYIVDKLGQD 179

Query: 78  GELSTLRVLGSDQLISLEEFHRNIGP 1
           G  STLRVLGS+QLISLEEF +NIGP
Sbjct: 180 GAPSTLRVLGSNQLISLEEFQKNIGP 205


>ref|XP_003525326.1| PREDICTED: WD repeat-containing protein YMR102C-like [Glycine max]
          Length = 720

 Score =  196 bits (497), Expect = 2e-48
 Identities = 104/146 (71%), Positives = 119/146 (81%), Gaps = 1/146 (0%)
 Frame = -2

Query: 435 YVTRHQVWTNNLQSVHLRRLNFIRWMGLESDTDANSIEGEGLGDPSCGVDRVTTTSGAVL 256
           +VTR+QVW   L+SVH RRLNF+RWM LESD +  S++GE LGD  CG+DR+T TSGAVL
Sbjct: 38  HVTRYQVWAKKLESVHQRRLNFLRWMDLESDLNY-SMKGEELGDQPCGIDRITATSGAVL 96

Query: 255 RNSVAAE-GIPLTSDQIVLDSLSNEASSSLQNRGDRENLACMIRNLDDGTQYVVDKLDQD 79
           R S A E G+P TS+QIVLDSLS+EAS S +N    ENLACMIRNLDDGTQY+VDKL QD
Sbjct: 97  RTSFAVEEGLPSTSNQIVLDSLSDEASGSQENC---ENLACMIRNLDDGTQYIVDKLGQD 153

Query: 78  GELSTLRVLGSDQLISLEEFHRNIGP 1
           G  STLRVLGS+QLISLEEF RNIGP
Sbjct: 154 GAPSTLRVLGSNQLISLEEFQRNIGP 179


>ref|XP_002518879.1| WD-repeat protein, putative [Ricinus communis]
           gi|223541866|gb|EEF43412.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 743

 Score =  114 bits (284), Expect = 1e-23
 Identities = 63/144 (43%), Positives = 92/144 (63%), Gaps = 2/144 (1%)
 Frame = -2

Query: 429 TRHQVWTNNLQSVHLRRLNFIRWMGLESDT--DANSIEGEGLGDPSCGVDRVTTTSGAVL 256
           ++++VW  + +SV+ RR  F++WM  + +T  + +SI  E       G+DR+  T+GAVL
Sbjct: 47  SQYEVWIKSPESVYDRRDRFLKWMNSDQNTISEGDSIN-ESFTKTQLGIDRLMDTTGAVL 105

Query: 255 RNSVAAEGIPLTSDQIVLDSLSNEASSSLQNRGDRENLACMIRNLDDGTQYVVDKLDQDG 76
           R S   +G  L S +  + S S+E   SL++    +N  C IRNLDDGT++VVD+LDQDG
Sbjct: 106 RTSGLGDG--LLSTETPVSSQSSETQESLEDGSVDDNFVCTIRNLDDGTEFVVDELDQDG 163

Query: 75  ELSTLRVLGSDQLISLEEFHRNIG 4
            LS LR +GS+Q +S EEF R IG
Sbjct: 164 MLSRLRKVGSNQSLSFEEFQRTIG 187


>ref|XP_004143851.1| PREDICTED: uncharacterized protein LOC101204856 [Cucumis sativus]
           gi|449501765|ref|XP_004161452.1| PREDICTED:
           uncharacterized LOC101204856 [Cucumis sativus]
          Length = 743

 Score =  103 bits (257), Expect = 1e-20
 Identities = 60/141 (42%), Positives = 83/141 (58%)
 Frame = -2

Query: 426 RHQVWTNNLQSVHLRRLNFIRWMGLESDTDANSIEGEGLGDPSCGVDRVTTTSGAVLRNS 247
           R+  W  NL+SV+ RR  F +WMGL+ D + ++ + E         DR+    G VLR S
Sbjct: 50  RYVGWIRNLESVYERRNKFFKWMGLDLDQNFDNTDEEEGDSWKVYRDRIIEDCGTVLRLS 109

Query: 246 VAAEGIPLTSDQIVLDSLSNEASSSLQNRGDRENLACMIRNLDDGTQYVVDKLDQDGELS 67
             +EG    S  + + S+SNEA  S  N    EN AC IRNLD+GT+++VD   QDG L+
Sbjct: 110 -GSEGE--LSSSLTISSMSNEAPESSGNVAVEENHACTIRNLDNGTEFIVDSFRQDGMLN 166

Query: 66  TLRVLGSDQLISLEEFHRNIG 4
            LR +GS++  S +EF RNIG
Sbjct: 167 MLREVGSNRSFSFDEFERNIG 187


>ref|XP_002263491.2| PREDICTED: uncharacterized protein LOC100249640 [Vitis vinifera]
          Length = 729

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 61/145 (42%), Positives = 85/145 (58%), Gaps = 7/145 (4%)
 Frame = -2

Query: 417 VWTNNLQSVHLRRLNFIRWMGLESDTDA-NSIEGEG-LGDPSCG-----VDRVTTTSGAV 259
           +W  N QSV+ RR  F++WM L+ D +   S E E   GD  C       DR T  SGAV
Sbjct: 48  LWIKNPQSVNERRDKFLKWMNLDMDQNRITSEESESESGDVCCDKIKIETDRATENSGAV 107

Query: 258 LRNSVAAEGIPLTSDQIVLDSLSNEASSSLQNRGDRENLACMIRNLDDGTQYVVDKLDQD 79
           LRNSV+ + +  +S Q  +   SN     L+    ++NL C I+NLDDGT++VVDKL  +
Sbjct: 108 LRNSVSEDRV--SSIQCSMSFRSN-GEELLEGGIRKDNLPCKIKNLDDGTEFVVDKLGGN 164

Query: 78  GELSTLRVLGSDQLISLEEFHRNIG 4
           G     R +GS++++S+EEF R IG
Sbjct: 165 GMHGKPREVGSNRVVSMEEFQRTIG 189


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