BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033507
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534744.1| PREDICTED: pentatricopeptide repeat-containi...   100   9e-20
ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containi...    95   7e-18
ref|XP_003534743.1| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16
ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15
ref|XP_003547288.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15

>ref|XP_003534744.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 705

 Score =  100 bits (250), Expect = 9e-20
 Identities = 57/100 (57%), Positives = 69/100 (69%), Gaps = 6/100 (6%)
 Frame = -2

Query: 284 SHPNQASLQVADSHDP------VGKNKIWINPNSPRAKLLRKKLSGTSTNSFLVKLAESL 123
           S  +QA  Q A SHDP      + K +IW+NPNSPRAK L+ K S ++  S+L +L ESL
Sbjct: 48  SKASQALHQDAASHDPDANSLSLSKTRIWVNPNSPRAKHLQPK-SPSARYSYLARLTESL 106

Query: 122 DSCDPTQPRVSAILNCLGDDVSERDAVLILDKMTNPETAP 3
           +SC P+   VS IL  L D+VSERDAV ILDKMTNPETAP
Sbjct: 107 NSCTPSAQHVSTILKGLRDNVSERDAVFILDKMTNPETAP 146


>ref|XP_003547290.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 692

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 53/102 (51%), Positives = 66/102 (64%), Gaps = 1/102 (0%)
 Frame = -2

Query: 308 PNFKFKTFSHPNQASLQVADSHDP-VGKNKIWINPNSPRAKLLRKKLSGTSTNSFLVKLA 132
           P F  +  +    A L   D+  P + KN IW+NP SPRAK L+K  S  + +S L KLA
Sbjct: 39  PRFSLQPVNTLQDAKLDDPDAKSPSLSKNSIWVNPRSPRAKHLQKN-SPHARSSSLTKLA 97

Query: 131 ESLDSCDPTQPRVSAILNCLGDDVSERDAVLILDKMTNPETA 6
           +SLDSC+PT+  VS ILN L D+VSERDAV IL+ M NP TA
Sbjct: 98  KSLDSCNPTEQHVSEILNVLRDNVSERDAVFILNTMVNPNTA 139


>ref|XP_003534743.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 693

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 51/103 (49%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
 Frame = -2

Query: 308 PNFKFKTFSH-PNQASLQVADSHDP-VGKNKIWINPNSPRAKLLRKKLSGTSTNSFLVKL 135
           P F F+ F+   + A L   D+  P + K   W+NP SPRAK L++  S  + +S L KL
Sbjct: 39  PRFSFQPFNTLQDAAKLDDPDAKSPSLSKKSFWVNPRSPRAKQLQQN-SPHARSSSLTKL 97

Query: 134 AESLDSCDPTQPRVSAILNCLGDDVSERDAVLILDKMTNPETA 6
           A+SLDSC+PT+  VS ILN LG++V+ERDAV IL+ M NP TA
Sbjct: 98  AKSLDSCNPTEEHVSEILNVLGNNVAERDAVFILNTMANPNTA 140


>ref|XP_002269600.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic [Vitis vinifera]
          Length = 701

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 46/84 (54%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
 Frame = -2

Query: 251 DSHDPVGKNK--IWINPNSPRAKLLRKKLSGTSTNSFLVKLAESLDSCDPTQPRVSAILN 78
           +S DP  K K  IW+NP SPRA  LR+  S  +  + LVK+AESLDSC+ T+  VS +L 
Sbjct: 77  NSQDPDRKTKSYIWVNPRSPRASKLRQH-SYDARYASLVKIAESLDSCEATEEDVSQVLR 135

Query: 77  CLGDDVSERDAVLILDKMTNPETA 6
           CLGD + E+DAV++L+ MTNPETA
Sbjct: 136 CLGDKILEQDAVIVLNNMTNPETA 159


>ref|XP_003547288.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16390,
           chloroplastic-like [Glycine max]
          Length = 706

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 52/108 (48%), Positives = 63/108 (58%), Gaps = 8/108 (7%)
 Frame = -2

Query: 305 NFKFKTFSHPNQASLQVADSH--------DPVGKNKIWINPNSPRAKLLRKKLSGTSTNS 150
           +FK   FS  +Q    + D+          P+ K  IW+NP SPRAK L K  S  + +S
Sbjct: 58  HFKLPNFSSSHQPKTLLQDAKLDDPNAKSSPLSKTSIWVNPKSPRAKHLWKN-SYHARSS 116

Query: 149 FLVKLAESLDSCDPTQPRVSAILNCLGDDVSERDAVLILDKMTNPETA 6
            L KLA+SLDSC+PTQ  VS IL  LGD V E DAV IL+ M NP TA
Sbjct: 117 SLTKLAKSLDSCNPTQEHVSEILKVLGDSVLEPDAVFILNSMVNPYTA 164