BLASTX nr result

ID: Glycyrrhiza23_contig00033499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033499
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518177.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...   101   7e-20
ref|XP_003537115.1| PREDICTED: E3 ubiquitin-protein ligase PUB23...    90   2e-16
ref|XP_003535700.1| PREDICTED: E3 ubiquitin-protein ligase PUB22...    90   2e-16
ref|XP_003520716.1| PREDICTED: E3 ubiquitin-protein ligase PUB22...    88   6e-16
ref|XP_003554468.1| PREDICTED: E3 ubiquitin-protein ligase PUB22...    88   8e-16

>ref|XP_003518177.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Glycine max]
          Length = 418

 Score =  101 bits (251), Expect = 7e-20
 Identities = 52/86 (60%), Positives = 73/86 (84%), Gaps = 1/86 (1%)
 Frame = +2

Query: 2   SSHGIERIPTPKSPVTKSLIQKLLKDYTSNSNSPHSQIQCLKSLKTIASESESNKRCIES 181
           +SHG++RIPTPK PV K+LI+KLL++ TS S+SP  Q++ L++LK+IASES+SNKRCIES
Sbjct: 78  ASHGVQRIPTPKPPVDKTLIEKLLRN-TSASDSPSLQLRSLRTLKSIASESQSNKRCIES 136

Query: 182 S-GAVDFLATIITSNTVSSLTLVDSE 256
           + GAV+FLATIIT+ T ++  L+D +
Sbjct: 137 AEGAVNFLATIITTTTTTTTNLLDDD 162


>ref|XP_003537115.1| PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Glycine max]
          Length = 420

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 48/83 (57%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
 Frame = +2

Query: 2   SSHGIERIPTPKSPVTKSLIQKLLKDYTSNSNSPHSQIQCLKSLKTIASESESNKRCIES 181
           +SHG++RIPTPK PV K+LI+KLL+D  S S+SP  Q++ L++LK+IASES+SNKRCIES
Sbjct: 79  ASHGVQRIPTPKPPVDKTLIEKLLRD-ASASDSPSLQLRSLRTLKSIASESQSNKRCIES 137

Query: 182 S-GAVDFLATIITSNTVSSLTLV 247
           +  AV FLA+ IT+    + T V
Sbjct: 138 AKDAVSFLASFITTTVTVTTTTV 160


>ref|XP_003535700.1| PREDICTED: E3 ubiquitin-protein ligase PUB22-like [Glycine max]
          Length = 421

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/74 (60%), Positives = 58/74 (78%)
 Frame = +2

Query: 2   SSHGIERIPTPKSPVTKSLIQKLLKDYTSNSNSPHSQIQCLKSLKTIASESESNKRCIES 181
           +SHGIERIPTPK PV K+ I KLLKD      + HS + CL+ LK+IAS SE+NKRC+E+
Sbjct: 81  ASHGIERIPTPKPPVNKNQISKLLKD------ASHSPLTCLRRLKSIASGSETNKRCMEA 134

Query: 182 SGAVDFLATIITSN 223
           SGAV+FLA+I+ +N
Sbjct: 135 SGAVEFLASIVINN 148


>ref|XP_003520716.1| PREDICTED: E3 ubiquitin-protein ligase PUB22-like [Glycine max]
          Length = 420

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/74 (58%), Positives = 57/74 (77%)
 Frame = +2

Query: 2   SSHGIERIPTPKSPVTKSLIQKLLKDYTSNSNSPHSQIQCLKSLKTIASESESNKRCIES 181
           +SHGIERIPTPK P+ K+ I KLLKD      + HS + CL+ LK+IAS SE+NKRC+E+
Sbjct: 81  TSHGIERIPTPKPPINKNQISKLLKD------ASHSPLTCLRRLKSIASGSETNKRCMEA 134

Query: 182 SGAVDFLATIITSN 223
           SG V+FLA+I+ +N
Sbjct: 135 SGVVEFLASIVINN 148


>ref|XP_003554468.1| PREDICTED: E3 ubiquitin-protein ligase PUB22-like [Glycine max]
          Length = 419

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
 Frame = +2

Query: 2   SSHGIERIPTPKSPVTKSLIQKLLKDYTSNSNSPHSQIQCLKSLKTIASESESNKRCIES 181
           +SHGIERIPTPK PV K+ I KLLKD      + HS + CL+ LK+I+S SE+NKRC+E+
Sbjct: 79  ASHGIERIPTPKPPVNKNQISKLLKD------ASHSPLTCLRRLKSISSGSETNKRCMEA 132

Query: 182 SGAVDFLATII--TSNTVSSLTLVDS 253
           SGAV+FLA+I+  T+  + S    DS
Sbjct: 133 SGAVEFLASIVINTNRNIDSSHEADS 158


Top