BLASTX nr result

ID: Glycyrrhiza23_contig00033489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033489
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611391.1| DNA repair endonuclease UVH1 [Medicago trunc...   185   3e-45
ref|XP_003539104.1| PREDICTED: DNA repair endonuclease UVH1-like...   168   4e-40
ref|XP_004148364.1| PREDICTED: DNA repair endonuclease UVH1-like...   107   1e-21
ref|XP_002531224.1| DNA repair endonuclease xp-f / mei-9 / rad1,...    95   7e-18
ref|XP_002326681.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15

>ref|XP_003611391.1| DNA repair endonuclease UVH1 [Medicago truncatula]
           gi|355512726|gb|AES94349.1| DNA repair endonuclease UVH1
           [Medicago truncatula]
          Length = 984

 Score =  185 bits (470), Expect = 3e-45
 Identities = 96/130 (73%), Positives = 104/130 (80%)
 Frame = -1

Query: 391 EEWKKYLLNKVQLRDIVHXXXXXXXXKGFGILDGVTPITTAQNAETGSINKQEHDALQAA 212
           +EWKKYLLNKVQLRD+VH        KGFGIL+GVTPI+ AQN ETG INKQEHDAL AA
Sbjct: 452 DEWKKYLLNKVQLRDVVHKKKKPKDPKGFGILNGVTPISLAQNTETGGINKQEHDALLAA 511

Query: 211 ASELRNLAENDRVVEDIPQPDSGGRVRAKGKRKLGNRNGPTITGDGSGVQNDNKEEPTSG 32
           AS+LRNLAE + VVED PQ D GG VR KGKRKLGNRNGP I  DGSGVQ++NKEE TSG
Sbjct: 512 ASKLRNLAEKNHVVEDTPQSDLGGHVRGKGKRKLGNRNGPIII-DGSGVQSNNKEEVTSG 570

Query: 31  KIGTCDSKNK 2
           K G  DSKNK
Sbjct: 571 KTGMSDSKNK 580


>ref|XP_003539104.1| PREDICTED: DNA repair endonuclease UVH1-like [Glycine max]
          Length = 967

 Score =  168 bits (426), Expect = 4e-40
 Identities = 93/132 (70%), Positives = 102/132 (77%), Gaps = 2/132 (1%)
 Frame = -1

Query: 391 EEWKKYLLNKVQLRDIVHXXXXXXXXK--GFGILDGVTPITTAQNAETGSINKQEHDALQ 218
           EEWKKYLLNKVQLRDIV+        K  GFGILDGVTPI   Q+AET SI+KQEHDAL 
Sbjct: 452 EEWKKYLLNKVQLRDIVNKKKKPKDPKPKGFGILDGVTPIKPVQSAETTSISKQEHDALL 511

Query: 217 AAASELRNLAENDRVVEDIPQPDSGGRVRAKGKRKLGNRNGPTITGDGSGVQNDNKEEPT 38
           AAAS+LRN+AEND V ED PQPDSGG+ RAK KRK+G RN P I  DGSGVQN+NK + T
Sbjct: 512 AAASKLRNIAENDHVGEDTPQPDSGGQGRAKRKRKVGIRNDPVIL-DGSGVQNNNKAQST 570

Query: 37  SGKIGTCDSKNK 2
           S KIG  DSKNK
Sbjct: 571 SDKIGMSDSKNK 582


>ref|XP_004148364.1| PREDICTED: DNA repair endonuclease UVH1-like [Cucumis sativus]
           gi|449505229|ref|XP_004162411.1| PREDICTED: DNA repair
           endonuclease UVH1-like [Cucumis sativus]
          Length = 1003

 Score =  107 bits (267), Expect = 1e-21
 Identities = 63/130 (48%), Positives = 76/130 (58%), Gaps = 1/130 (0%)
 Frame = -1

Query: 391 EEWKKYLLNKVQLRDIV-HXXXXXXXXKGFGILDGVTPITTAQNAETGSINKQEHDALQA 215
           EEW+ YLLNK+QLRD+  H        KGFG+LDGV PIT AQNAE  S NKQE +AL A
Sbjct: 455 EEWENYLLNKIQLRDMKPHNKKKHKDPKGFGVLDGVVPITPAQNAEASSFNKQERNALLA 514

Query: 214 AASELRNLAENDRVVEDIPQPDSGGRVRAKGKRKLGNRNGPTITGDGSGVQNDNKEEPTS 35
           AASE+RN A+ND  V +  Q D     +A GKRK  +R GP +   G   +   K     
Sbjct: 515 AASEIRNRAKNDSAVVEDQQNDMDSTEQATGKRKGRSRKGPDVDNIGY-AKGKKKVLNKK 573

Query: 34  GKIGTCDSKN 5
           G +   DS N
Sbjct: 574 GSVDVGDSNN 583


>ref|XP_002531224.1| DNA repair endonuclease xp-f / mei-9 / rad1, putative [Ricinus
           communis] gi|223529184|gb|EEF31160.1| DNA repair
           endonuclease xp-f / mei-9 / rad1, putative [Ricinus
           communis]
          Length = 887

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 61/127 (48%), Positives = 71/127 (55%), Gaps = 7/127 (5%)
 Frame = -1

Query: 391 EEWKKYLLNKVQLRDIV---HXXXXXXXXKGFGILDGVTPITTAQNAETGSINKQEHDAL 221
           EEW+KYLL+KV+L  +             KGFGILDGV P+  AQNAE  SINKQE+DAL
Sbjct: 378 EEWEKYLLSKVELHSMPTPQKKKPKPKESKGFGILDGVVPVIAAQNAEASSINKQENDAL 437

Query: 220 QAAASELRNLAENDRVVEDIPQP--DSGGRVR--AKGKRKLGNRNGPTITGDGSGVQNDN 53
            AA SE+RN    D +VED PQP  D G   +   KG+ K G  N        SG  N N
Sbjct: 438 LAAVSEIRNQHRKDYIVEDEPQPLVDGGKSCKTWGKGRNKRGRAN-----PQNSGEDNVN 492

Query: 52  KEEPTSG 32
            E   SG
Sbjct: 493 SELKISG 499


>ref|XP_002326681.1| predicted protein [Populus trichocarpa] gi|222834003|gb|EEE72480.1|
           predicted protein [Populus trichocarpa]
          Length = 982

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 53/119 (44%), Positives = 64/119 (53%), Gaps = 6/119 (5%)
 Frame = -1

Query: 391 EEWKKYLLNKVQLRDIV-----HXXXXXXXXKGFGILDGVTPITTAQNAETGSINKQEHD 227
           EEWKKYLL+KV+L  +               KGFGILDGV P+TT Q+AE  S NKQEHD
Sbjct: 453 EEWKKYLLSKVELGGLPAPEKKKAKLKPKEPKGFGILDGVVPVTTVQSAEASSTNKQEHD 512

Query: 226 ALQAAASELRNLAENDRVVEDIPQP-DSGGRVRAKGKRKLGNRNGPTITGDGSGVQNDN 53
            L  AAS++RN  +   VVED  QP     +  AK K K   + G     D     ND+
Sbjct: 513 VLLVAASKIRNQYKRGLVVEDELQPLADSSKKGAKEKGKEHKKRGQATGQDSGSKDNDS 571


Top