BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033486
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...    62   6e-08
ref|XP_003548282.1| PREDICTED: TMV resistance protein N-like [Gl...    61   8e-08
gb|AAD22368.1| putative non-LTR retroelement reverse transcripta...    59   3e-07

>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 6/144 (4%)
 Frame = +2

Query: 5   CPLCNQKEETILHMVRDCEVISQIWLFLYENSLPRMFSVEDTRLWISQNL-KMNISIKGV 181
           CP C +++ET++H++RDC   +Q+WL L  ++    F   D R W+  NL K  I     
Sbjct: 505 CPCCAREDETVIHVLRDCVHSTQVWLRLIPHNYITNFFSFDCREWVFNNLNKKGIGDNPA 564

Query: 182 KWKTLFGASTSCIWQARNERVFQGKVIATRELGIKALYQALAFHQSYVDLQQLNAPLARN 361
            W+T F  +   +W  RN+ +F        E+G +         Q +    + N  L   
Sbjct: 565 TWQTTFMTTCWYLWNWRNKSIF--------EIGFQRPSNPTLVIQKFTREIEDNTKLVHK 616

Query: 362 SYD-----LIHWKALDPGILKLNC 418
           S        I W     G +KLNC
Sbjct: 617 SSHQKETIYIGWMRPPFGWVKLNC 640


>ref|XP_003548282.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1420

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/81 (34%), Positives = 41/81 (50%)
 Frame = +2

Query: 5    CPLCNQKEETILHMVRDCEVISQIWLFLYENSLPRMFSVEDTRLWISQNLKMNISIKGVK 184
            CP C + EET LH +RDC  ++  W  +    L   F   D  +W+  NL  + S     
Sbjct: 1113 CPRCPELEETCLHALRDCPKVAAFWRSVLPKKLAPKFFNGDVAVWLETNL--SFSEAAFF 1170

Query: 185  WKTLFGASTSCIWQARNERVF 247
            W T FG +   +W++RN+ VF
Sbjct: 1171 WPTFFGIAVELLWESRNDLVF 1191


>gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 321

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 1/162 (0%)
 Frame = +2

Query: 2   LCPLCNQKEETILHMVRDCEVISQIWLFLYENSLPRMFSVEDTRLWISQNLKMNISIKGV 181
           +C +C   EETILH++RDC  ++ IW  L      R F       WI +NL+   S    
Sbjct: 34  VCQICQGGEETILHVLRDCPAMAGIWSRLVPRDQIRQFFTASLLEWIYKNLRERGS---- 89

Query: 182 KWKTLFGASTSCIWQARNERVFQGK-VIATRELGIKALYQALAFHQSYVDLQQLNAPLAR 358
            W T+F  +    W+ R   +F G      R   IK L + +A   ++V   ++      
Sbjct: 90  -WPTVFVMAVWWGWKWRCGNIFGGNGKCRDRVKFIKDLAEEVAIANAFVKGNEVRVSRVE 148

Query: 359 NSYDLIHWKALDPGILKLNCXXXXXXXXXXXXXXXXLKDHRG 484
               L+ W + + G +KLN                 L+DH G
Sbjct: 149 R---LVSWVSPEDGWVKLNTDGASRGNPGFATAGGVLRDHNG 187