BLASTX nr result

ID: Glycyrrhiza23_contig00033484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033484
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617531.1| Putative disease-resistance protein SR1 [Med...    65   7e-09
ref|XP_002325496.1| tir-nbs-lrr resistance protein [Populus tric...    63   2e-08
gb|AFK47282.1| unknown [Lotus japonicus]                               58   7e-07
ref|XP_003617519.1| TMV resistance protein N [Medicago truncatul...    58   7e-07
ref|XP_002339290.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|XP_003617531.1| Putative disease-resistance protein SR1 [Medicago truncatula]
           gi|355518866|gb|AET00490.1| Putative disease-resistance
           protein SR1 [Medicago truncatula]
          Length = 356

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 40/81 (49%), Positives = 48/81 (59%)
 Frame = -2

Query: 245 KNDVFLSYREEDTGSTFTANLYDALSRKRIKTSFILPREQVEDGTTGGDQVVSPSTLKAX 66
           K DVFLS+R EDT  TF  NLY AL  K+IKT F  P +Q+++     +  +SPS LKA 
Sbjct: 14  KYDVFLSFRGEDTYCTFAGNLYHALRNKKIKTFF--PHDQIQNDDE--ELQLSPSILKAI 69

Query: 65  XXXXXXXXXXSKNYAFSTRCL 3
                     SKNYA STRCL
Sbjct: 70  QESRISIVVLSKNYATSTRCL 90


>ref|XP_002325496.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222862371|gb|EEE99877.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1254

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 37/84 (44%), Positives = 50/84 (59%)
 Frame = -2

Query: 254 HNRKNDVFLSYREEDTGSTFTANLYDALSRKRIKTSFILPREQVEDGTTGGDQVVSPSTL 75
           H RK DVFLS+R EDT + FT++LYDAL RK+IKT        ++DG   G++ ++P+ L
Sbjct: 9   HKRKYDVFLSFRGEDTRNNFTSHLYDALCRKKIKTF-------IDDGLERGEE-ITPALL 60

Query: 74  KAXXXXXXXXXXXSKNYAFSTRCL 3
           K            SKNYA S  C+
Sbjct: 61  KKIEESRISVVIFSKNYASSPWCV 84


>gb|AFK47282.1| unknown [Lotus japonicus]
          Length = 185

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/92 (36%), Positives = 50/92 (54%)
 Frame = -2

Query: 278 SVDQFMATHNRKNDVFLSYREEDTGSTFTANLYDALSRKRIKTSFILPREQVEDGTTGGD 99
           ++D+   T  ++ DVFLS+  ED+GSTFT N+Y+AL +KRIKT F    +  E  +   D
Sbjct: 8   AIDELSTTRTQRYDVFLSFCGEDSGSTFTGNIYNALRQKRIKTFFQPENDDGEPTSLSVD 67

Query: 98  QVVSPSTLKAXXXXXXXXXXXSKNYAFSTRCL 3
           + +  S L             S++YA S  CL
Sbjct: 68  KAIQESRL--------IIVVFSEHYAVSASCL 91


>ref|XP_003617519.1| TMV resistance protein N [Medicago truncatula]
           gi|355518854|gb|AET00478.1| TMV resistance protein N
           [Medicago truncatula]
          Length = 324

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/79 (44%), Positives = 43/79 (54%)
 Frame = -2

Query: 239 DVFLSYREEDTGSTFTANLYDALSRKRIKTSFILPREQVEDGTTGGDQVVSPSTLKAXXX 60
           DVFL +R EDT  TFT NLY  LS KRIKT F     Q+++     +Q+     LKA   
Sbjct: 12  DVFLCFRGEDTYCTFTGNLYHGLSNKRIKTFFF--PHQIQNDYNDNEQLQHSPILKAIRE 69

Query: 59  XXXXXXXXSKNYAFSTRCL 3
                   S+N+A STRCL
Sbjct: 70  SRISIVVLSENFASSTRCL 88


>ref|XP_002339290.1| predicted protein [Populus trichocarpa] gi|222874825|gb|EEF11956.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/84 (40%), Positives = 49/84 (58%)
 Frame = -2

Query: 254 HNRKNDVFLSYREEDTGSTFTANLYDALSRKRIKTSFILPREQVEDGTTGGDQVVSPSTL 75
           H  K DVFLS+R +DT + FT++LYDAL RK+IKT        +++G   G++ ++P+ L
Sbjct: 9   HKWKYDVFLSFRGQDTRNNFTSHLYDALCRKKIKTF-------IDNGLERGEE-ITPALL 60

Query: 74  KAXXXXXXXXXXXSKNYAFSTRCL 3
           K            SKNYA S  C+
Sbjct: 61  KTIEESRISVVIFSKNYASSPWCV 84