BLASTX nr result

ID: Glycyrrhiza23_contig00033473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033473
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530174.1| PREDICTED: GATA transcription factor 2-like ...   120   1e-25
ref|XP_003521089.1| PREDICTED: GATA transcription factor 2-like ...   115   3e-24
ref|XP_002880154.1| hypothetical protein ARALYDRAFT_903940 [Arab...    62   4e-08
ref|NP_182031.1| GATA transcription factor 2 [Arabidopsis thalia...    62   4e-08
gb|ADK63416.1| GATA type zinc finger protein [Brassica rapa]           59   3e-07

>ref|XP_003530174.1| PREDICTED: GATA transcription factor 2-like [Glycine max]
          Length = 237

 Score =  120 bits (300), Expect = 1e-25
 Identities = 72/139 (51%), Positives = 85/139 (61%), Gaps = 11/139 (7%)
 Frame = +3

Query: 3   MDMYGGSLSNPPPPDHCLRIDDFLDFSN--------LPPPQHS---FPDHSDFFANFPSV 149
           MD+YG   +    P  CL IDDFLDFSN        LPPPQ+S     D ++ F NFPSV
Sbjct: 1   MDLYGSFST----PSDCLHIDDFLDFSNITTDTHHHLPPPQNSPLISHDDANLFFNFPSV 56

Query: 150 PSDEAAELEWLSQFIDDTTTSFHDFPPSNHTIPIGSRTTSFLANNDANTDHNSTTKSPDH 329
           P+DEAAELEWLSQF+DD  TSFH FP    T  IGS +TSFL+NN+   D+N   KS   
Sbjct: 57  PTDEAAELEWLSQFVDDDATSFHSFPA---TASIGSHSTSFLSNNNNRNDNNEYPKS-SL 112

Query: 330 VIXXXXXXXVAGKSRSKRE 386
                    VAGKSR++RE
Sbjct: 113 SSNIPCSSAVAGKSRARRE 131


>ref|XP_003521089.1| PREDICTED: GATA transcription factor 2-like [Glycine max]
          Length = 226

 Score =  115 bits (289), Expect = 3e-24
 Identities = 68/141 (48%), Positives = 83/141 (58%), Gaps = 13/141 (9%)
 Frame = +3

Query: 3   MDMYGGSLSNPPPPDHCLRIDDFLDFSNL-----------PPPQHS--FPDHSDFFANFP 143
           MD+YG   +    P  CL IDDFLDFSN+           PPPQ+S       +FF NFP
Sbjct: 1   MDLYGSFST----PSDCLHIDDFLDFSNITTTTTDTHHHFPPPQNSPSISHDPNFFLNFP 56

Query: 144 SVPSDEAAELEWLSQFIDDTTTSFHDFPPSNHTIPIGSRTTSFLANNDANTDHNSTTKSP 323
           SVPSDEA ELEWLSQF++D  TSFH+ PP      IGS TT FL+NN+ N ++N   KS 
Sbjct: 57  SVPSDEAVELEWLSQFVNDEATSFHNIPP---PASIGSHTTPFLSNNNRNDNNNEYPKSS 113

Query: 324 DHVIXXXXXXXVAGKSRSKRE 386
                      +AGKSR++RE
Sbjct: 114 S------SSPVLAGKSRARRE 128


>ref|XP_002880154.1| hypothetical protein ARALYDRAFT_903940 [Arabidopsis lyrata subsp.
           lyrata] gi|297325993|gb|EFH56413.1| hypothetical protein
           ARALYDRAFT_903940 [Arabidopsis lyrata subsp. lyrata]
          Length = 262

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 49/117 (41%), Positives = 57/117 (48%), Gaps = 28/117 (23%)
 Frame = +3

Query: 3   MDMYGGSLSNPPPPDHCLRIDDFLDFSN--------------------LPPPQ------H 104
           MD+YG  LS+P      LRIDD LDFSN                     PPPQ      H
Sbjct: 1   MDVYG--LSSPD----LLRIDDLLDFSNEDIFSASSSGGSTAATSSSSFPPPQNPNFHHH 54

Query: 105 SFPDHSDF--FANFPSVPSDEAAELEWLSQFIDDTTTSFHDFPPSNHTIPIGSRTTS 269
             P  +D   F +   VPSD+AA LEWLSQF+DD   SF DFP +    P+G   TS
Sbjct: 55  HLPSSADHHSFLHDICVPSDDAAHLEWLSQFVDD---SFADFPAN----PLGGTMTS 104


>ref|NP_182031.1| GATA transcription factor 2 [Arabidopsis thaliana]
           gi|62900344|sp|O49741.1|GATA2_ARATH RecName: Full=GATA
           transcription factor 2; Short=AtGATA-2
           gi|2959732|emb|CAA74000.1| homologous to GATA-binding
           transcription factors [Arabidopsis thaliana]
           gi|24030302|gb|AAN41321.1| putative GATA-type zinc
           finger transcription factor [Arabidopsis thaliana]
           gi|222423708|dbj|BAH19820.1| AT2G45050 [Arabidopsis
           thaliana] gi|225898595|dbj|BAH30428.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|330255406|gb|AEC10500.1| GATA transcription factor 2
           [Arabidopsis thaliana]
          Length = 264

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 49/117 (41%), Positives = 57/117 (48%), Gaps = 28/117 (23%)
 Frame = +3

Query: 3   MDMYGGSLSNPPPPDHCLRIDDFLDFSN--------------------LPPPQ------H 104
           MD+YG  LS+P      LRIDD LDFSN                     PPPQ      H
Sbjct: 1   MDVYG--LSSPD----LLRIDDLLDFSNEDIFSASSSGGSTAATSSSSFPPPQNPSFHHH 54

Query: 105 SFPDHSDF--FANFPSVPSDEAAELEWLSQFIDDTTTSFHDFPPSNHTIPIGSRTTS 269
             P  +D   F +   VPSD+AA LEWLSQF+DD   SF DFP +    P+G   TS
Sbjct: 55  HLPSSADHHSFLHDICVPSDDAAHLEWLSQFVDD---SFADFPAN----PLGGTMTS 104


>gb|ADK63416.1| GATA type zinc finger protein [Brassica rapa]
          Length = 256

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 53/161 (32%), Positives = 66/161 (40%), Gaps = 33/161 (20%)
 Frame = +3

Query: 3   MDMYGGSLSNPPPPDHCLRIDDFLDFSNLP------------------PPQ------HSF 110
           MD+YG S  +       LR+DD LDFSN                    PPQ      H  
Sbjct: 1   MDVYGLSSQD------LLRVDDLLDFSNEDIFSASSSTSTAATSPSSFPPQNPNYHHHHL 54

Query: 111 PDHSDF-FANFPSVPSDEAAELEWLSQFIDDTTTSFHDFPPSNHTIPIGSRTTSFLANND 287
           P  +D  F +   VPSD+AA LEWLSQF+DD   SF DFP +    P+G   TS      
Sbjct: 55  PSSADHSFLHDICVPSDDAAHLEWLSQFVDD---SFADFPAN----PLGGTMTSVKTETS 107

Query: 288 ANTDHNSTTKSPDHVI--------XXXXXXXVAGKSRSKRE 386
                 S    P   +               VAG+S+ K+E
Sbjct: 108 FTGKPRSKRSKPPSTLVGTWAPMSETDQNIHVAGRSKPKKE 148


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