BLASTX nr result

ID: Glycyrrhiza23_contig00033415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033415
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea...   108   6e-22
ref|XP_003524615.1| PREDICTED: replication protein A 70 kDa DNA-...   106   2e-21
ref|XP_003550703.1| PREDICTED: replication protein A 70 kDa DNA-...   100   1e-19
ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-...    99   5e-19
emb|CBI15109.3| unnamed protein product [Vitis vinifera]               99   5e-19

>dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea nil]
          Length = 604

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/84 (64%), Positives = 68/84 (80%)
 Frame = -1

Query: 252 MAKSVSPDAISTLLANXXXXXXXXXXDIVVQVLDLKQSGNRYMFNASDGKMKLRAILPSN 73
           M +SV+PDAIS +LAN          +++VQV+DLKQ+GNRYMF A+DGKMKL+AIL S+
Sbjct: 1   MERSVTPDAISAILANPSPDSGSDLPELIVQVVDLKQAGNRYMFTANDGKMKLKAILQSS 60

Query: 72  QYSEVLSGNIQNLGLIRILDYTLN 1
             SEV+SG+IQNLGL+RILDYTLN
Sbjct: 61  LSSEVISGSIQNLGLVRILDYTLN 84


>ref|XP_003524615.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Glycine max]
          Length = 620

 Score =  106 bits (264), Expect = 2e-21
 Identities = 54/83 (65%), Positives = 67/83 (80%)
 Frame = -1

Query: 249 AKSVSPDAISTLLANXXXXXXXXXXDIVVQVLDLKQSGNRYMFNASDGKMKLRAILPSNQ 70
           AK+V+PDA+STLLAN          DIVVQVLDLK +GN+YMF A+DGK KL+A++PS+ 
Sbjct: 3   AKTVTPDAVSTLLANPSPDSTSDLPDIVVQVLDLKATGNKYMFTANDGKTKLKAMIPSDM 62

Query: 69  YSEVLSGNIQNLGLIRILDYTLN 1
            S+VLSG IQNLGLIR+LDYT+N
Sbjct: 63  RSQVLSGAIQNLGLIRVLDYTVN 85


>ref|XP_003550703.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Glycine max]
          Length = 600

 Score =  100 bits (250), Expect = 1e-19
 Identities = 51/83 (61%), Positives = 65/83 (78%)
 Frame = -1

Query: 249 AKSVSPDAISTLLANXXXXXXXXXXDIVVQVLDLKQSGNRYMFNASDGKMKLRAILPSNQ 70
           AK+V+PDA+S LLAN          +IVVQVLDLK +GN+YMF A+DGK KL+A++ S+ 
Sbjct: 3   AKTVTPDAVSMLLANTCPDSSSDLPEIVVQVLDLKATGNKYMFTANDGKTKLKAMISSDM 62

Query: 69  YSEVLSGNIQNLGLIRILDYTLN 1
            S+VLSG IQNLGLIR+LDYT+N
Sbjct: 63  CSQVLSGAIQNLGLIRVLDYTVN 85


>ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 603

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 52/84 (61%), Positives = 63/84 (75%)
 Frame = -1

Query: 252 MAKSVSPDAISTLLANXXXXXXXXXXDIVVQVLDLKQSGNRYMFNASDGKMKLRAILPSN 73
           MA + +   IS +L+N          D+VVQV+DLK +GNRYMF ASDG MKL+AILPSN
Sbjct: 1   MASAPTAGGISKVLSNPSPDSPSDVPDVVVQVIDLKATGNRYMFTASDGVMKLKAILPSN 60

Query: 72  QYSEVLSGNIQNLGLIRILDYTLN 1
             S+V+SGNIQNLGLIRILDY+LN
Sbjct: 61  LTSDVISGNIQNLGLIRILDYSLN 84


>emb|CBI15109.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/84 (57%), Positives = 64/84 (76%)
 Frame = -1

Query: 252 MAKSVSPDAISTLLANXXXXXXXXXXDIVVQVLDLKQSGNRYMFNASDGKMKLRAILPSN 73
           MAKS++P+ IST+L+N          +I+VQV+DL   GNRY F A+DGKMKL+A+ PS+
Sbjct: 1   MAKSITPNGISTILSNPSPDSSTELPEIIVQVIDLTPIGNRYKFTANDGKMKLKAMFPSS 60

Query: 72  QYSEVLSGNIQNLGLIRILDYTLN 1
             SE+ SGNIQNLGLI+++DYTLN
Sbjct: 61  FSSEINSGNIQNLGLIQVIDYTLN 84


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