BLASTX nr result

ID: Glycyrrhiza23_contig00033407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033407
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533689.1| PREDICTED: sacsin-like [Glycine max]              150   8e-35
ref|XP_003556575.1| PREDICTED: sacsin-like [Glycine max]              142   4e-32
ref|XP_002527141.1| protein binding protein, putative [Ricinus c...   115   3e-24
ref|XP_002307173.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
ref|XP_004158223.1| PREDICTED: LOW QUALITY PROTEIN: sacsin-like ...   111   7e-23

>ref|XP_003533689.1| PREDICTED: sacsin-like [Glycine max]
          Length = 4760

 Score =  150 bits (380), Expect = 8e-35
 Identities = 74/79 (93%), Positives = 74/79 (93%)
 Frame = -1

Query: 237  LGIREFLQPADYANILCRMANRKGSSPLDTNEIRAVTLIVHHLAEVYLHEQKVQLYLPDV 58
            LGIREFLQPADYANILCRMA RKGSSPLDT EIRA TLIVHHLAEVY HE KVQLYLPDV
Sbjct: 1236 LGIREFLQPADYANILCRMAVRKGSSPLDTQEIRAATLIVHHLAEVYHHEHKVQLYLPDV 1295

Query: 57   SGRLFLAGDLVYNDAPWLL 1
            SGRLFLAGDLVYNDAPWLL
Sbjct: 1296 SGRLFLAGDLVYNDAPWLL 1314


>ref|XP_003556575.1| PREDICTED: sacsin-like [Glycine max]
          Length = 4756

 Score =  142 bits (357), Expect = 4e-32
 Identities = 71/79 (89%), Positives = 73/79 (92%)
 Frame = -1

Query: 237  LGIREFLQPADYANILCRMANRKGSSPLDTNEIRAVTLIVHHLAEVYLHEQKVQLYLPDV 58
            LGIREFLQPADYA+ILCRMA RKGSSPLDT EIR VTLIVHHLAEVY H + VQLYLPDV
Sbjct: 1236 LGIREFLQPADYAHILCRMAVRKGSSPLDTQEIRVVTLIVHHLAEVY-HHEPVQLYLPDV 1294

Query: 57   SGRLFLAGDLVYNDAPWLL 1
            SGRLFLAGDLVYNDAPWLL
Sbjct: 1295 SGRLFLAGDLVYNDAPWLL 1313


>ref|XP_002527141.1| protein binding protein, putative [Ricinus communis]
            gi|223533501|gb|EEF35243.1| protein binding protein,
            putative [Ricinus communis]
          Length = 4704

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/79 (67%), Positives = 63/79 (79%)
 Frame = -1

Query: 237  LGIREFLQPADYANILCRMANRKGSSPLDTNEIRAVTLIVHHLAEVYLHEQKVQLYLPDV 58
            LG++E+ +P DYANIL RMA RKGS PLD  E+RA  +IV HLAEV  H Q+V++YLPD+
Sbjct: 1243 LGVQEYFKPIDYANILARMALRKGSCPLDVQEVRAAVMIVQHLAEVQFHAQEVKIYLPDI 1302

Query: 57   SGRLFLAGDLVYNDAPWLL 1
            SGRLF   DLVYNDAPWLL
Sbjct: 1303 SGRLFPPNDLVYNDAPWLL 1321


>ref|XP_002307173.1| predicted protein [Populus trichocarpa] gi|222856622|gb|EEE94169.1|
            predicted protein [Populus trichocarpa]
          Length = 2870

 Score =  113 bits (282), Expect = 2e-23
 Identities = 59/79 (74%), Positives = 63/79 (79%)
 Frame = -1

Query: 237  LGIREFLQPADYANILCRMANRKGSSPLDTNEIRAVTLIVHHLAEVYLHEQKVQLYLPDV 58
            L IRE+ +P DYANIL RMA RK SSPLD  EIRA  LIV HLAEV  HEQ V++YLPDV
Sbjct: 1252 LDIREYFKPMDYANILGRMAVRKASSPLDAQEIRAAMLIVQHLAEVQFHEQ-VKIYLPDV 1310

Query: 57   SGRLFLAGDLVYNDAPWLL 1
            SGRLF A DLVYNDAPWLL
Sbjct: 1311 SGRLFPATDLVYNDAPWLL 1329



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
 Frame = -1

Query: 237  LGIREFLQPADYANILCRMANRKGSSPLDTNEIRAVTLIVHHLAEVYLHEQKVQ-----L 73
            LG+R      DY ++L R+ N     PL T+++  V  ++  +A+ +  +   +     L
Sbjct: 2686 LGVRLSFDIWDYFHVLQRLQNNLKGFPLSTDQLSFVHRVLEAVADCFSDKPMFEASNSAL 2745

Query: 72   YLPDVSGRLFLAGDLVYNDAPWL 4
             +PD SG L  AGDLVYNDAPW+
Sbjct: 2746 LIPDSSGVLMCAGDLVYNDAPWI 2768


>ref|XP_004158223.1| PREDICTED: LOW QUALITY PROTEIN: sacsin-like [Cucumis sativus]
          Length = 3586

 Score =  111 bits (277), Expect = 7e-23
 Identities = 54/79 (68%), Positives = 64/79 (81%)
 Frame = -1

Query: 237  LGIREFLQPADYANILCRMANRKGSSPLDTNEIRAVTLIVHHLAEVYLHEQKVQLYLPDV 58
            LGIREFL+P DYA IL RMA RKGSSPL+T E+RA  LIV HLAE  L +Q++ ++LPD+
Sbjct: 1243 LGIREFLKPNDYATILSRMATRKGSSPLNTQEVRAAILIVQHLAEAQLPQQQIDIHLPDI 1302

Query: 57   SGRLFLAGDLVYNDAPWLL 1
            S RLF A +LVYNDAPWLL
Sbjct: 1303 SCRLFPAKNLVYNDAPWLL 1321


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