BLASTX nr result

ID: Glycyrrhiza23_contig00033406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033406
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552763.1| PREDICTED: probable E3 ubiquitin-protein lig...   192   2e-47
ref|XP_003552762.1| PREDICTED: probable E3 ubiquitin-protein lig...   192   2e-47
ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein lig...   191   7e-47
ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putati...   182   3e-44
ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTP...   179   3e-43

>ref|XP_003552763.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Glycine max]
          Length = 459

 Score =  192 bits (489), Expect = 2e-47
 Identities = 93/119 (78%), Positives = 97/119 (81%), Gaps = 2/119 (1%)
 Frame = -1

Query: 352 MNGEGNEALV--KEKLVYMWGYLPGALPQXXXXXXXXXXXXPASCCDWRDVCGGGCGFAM 179
           MNGEG+EA+   KE LVYMWGYLPGALPQ            P S   W+DVCGGGCGFAM
Sbjct: 1   MNGEGSEAMQVEKESLVYMWGYLPGALPQRTPLLTPLLVRVPPSGYFWKDVCGGGCGFAM 60

Query: 178 AISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCVSATDCG 2
           AISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTE +IVKAAAGWAHCVS TDCG
Sbjct: 61  AISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEVTIVKAAAGWAHCVSVTDCG 119


>ref|XP_003552762.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Glycine max]
          Length = 472

 Score =  192 bits (489), Expect = 2e-47
 Identities = 93/119 (78%), Positives = 97/119 (81%), Gaps = 2/119 (1%)
 Frame = -1

Query: 352 MNGEGNEALV--KEKLVYMWGYLPGALPQXXXXXXXXXXXXPASCCDWRDVCGGGCGFAM 179
           MNGEG+EA+   KE LVYMWGYLPGALPQ            P S   W+DVCGGGCGFAM
Sbjct: 1   MNGEGSEAMQVEKESLVYMWGYLPGALPQRTPLLTPLLVRVPPSGYFWKDVCGGGCGFAM 60

Query: 178 AISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCVSATDCG 2
           AISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTE +IVKAAAGWAHCVS TDCG
Sbjct: 61  AISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEVTIVKAAAGWAHCVSVTDCG 119


>ref|XP_003538429.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 480

 Score =  191 bits (484), Expect = 7e-47
 Identities = 92/123 (74%), Positives = 97/123 (78%), Gaps = 6/123 (4%)
 Frame = -1

Query: 352 MNGEGNEALV------KEKLVYMWGYLPGALPQXXXXXXXXXXXXPASCCDWRDVCGGGC 191
           MNGEG+EA+       KE+LVYMWGYLPGALPQ            P S   W+DVCGGGC
Sbjct: 1   MNGEGSEAMQVEMEIEKERLVYMWGYLPGALPQRTPLLTPVLVRVPPSGYSWKDVCGGGC 60

Query: 190 GFAMAISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCVSAT 11
           GFAMAISEPGKLITWGSTDDLGQSYVTSGKHGE PEPFPLPTE +IVKAAAGWAHCVS T
Sbjct: 61  GFAMAISEPGKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEVTIVKAAAGWAHCVSVT 120

Query: 10  DCG 2
           DCG
Sbjct: 121 DCG 123


>ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
           gi|223536498|gb|EEF38145.1| Serine/threonine-protein
           kinase Nek8, putative [Ricinus communis]
          Length = 476

 Score =  182 bits (461), Expect = 3e-44
 Identities = 89/122 (72%), Positives = 95/122 (77%), Gaps = 5/122 (4%)
 Frame = -1

Query: 352 MNGEGNEAL-----VKEKLVYMWGYLPGALPQXXXXXXXXXXXXPASCCDWRDVCGGGCG 188
           MNGEG E +     VKEKLV+MWGYLPGALPQ             A    W+DVCGGGCG
Sbjct: 1   MNGEGKEVMKMEEMVKEKLVFMWGYLPGALPQRSPILSPVVVR--ADGYSWKDVCGGGCG 58

Query: 187 FAMAISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCVSATD 8
           FAMAISE GKLITWGSTDDLGQSYVTSGKHGE PEPFPLPTEASI+KAAAGWAHC++ATD
Sbjct: 59  FAMAISESGKLITWGSTDDLGQSYVTSGKHGEIPEPFPLPTEASIMKAAAGWAHCIAATD 118

Query: 7   CG 2
            G
Sbjct: 119 TG 120


>ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Vitis
           vinifera]
          Length = 484

 Score =  179 bits (453), Expect = 3e-43
 Identities = 92/124 (74%), Positives = 97/124 (78%), Gaps = 7/124 (5%)
 Frame = -1

Query: 352 MNGEG---NEALV----KEKLVYMWGYLPGALPQXXXXXXXXXXXXPASCCDWRDVCGGG 194
           MNGEG   +EA+V    +EKLV+M GYLPGALPQ            PAS   WRDVCGGG
Sbjct: 1   MNGEGKGPDEAVVMEGVREKLVFMMGYLPGALPQRSPLLSPIAVRSPASIHAWRDVCGGG 60

Query: 193 CGFAMAISEPGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCVSA 14
           CGFAMAISE GKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHC S 
Sbjct: 61  CGFAMAISESGKLITWGSTDDLGQSYVTSGKHGETPEPFPLPTEASIVKAAAGWAHCASV 120

Query: 13  TDCG 2
           T+ G
Sbjct: 121 TENG 124


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