BLASTX nr result

ID: Glycyrrhiza23_contig00033404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033404
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602504.1| Brassinosteroid receptor [Medicago truncatul...    54   3e-11
dbj|BAC99050.1| brassinosteroid receptor [Pisum sativum]               49   4e-11

>ref|XP_003602504.1| Brassinosteroid receptor [Medicago truncatula]
           gi|355491552|gb|AES72755.1| Brassinosteroid receptor
           [Medicago truncatula]
          Length = 1188

 Score = 54.3 bits (129), Expect(2) = 3e-11
 Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
 Frame = +1

Query: 187 GTFTSLESFEISCNRFTNELLVEVLTEMSRPRDLALSFNS-------SESRIAGSELECL 345
           G  TSL SF+IS N F  EL VEVL+EMS  ++L+++FN        S S+I G EL  L
Sbjct: 335 GACTSLTSFDISSNTFAGELQVEVLSEMSSLKELSVAFNDFVGPVPVSLSKITGLELLDL 394

Query: 346 CED------PKWLCSLPVGTD 390
             +      PKWLC    G +
Sbjct: 395 SSNNFTGTIPKWLCEEEFGNN 415



 Score = 38.5 bits (88), Expect(2) = 3e-11
 Identities = 31/81 (38%), Positives = 38/81 (46%), Gaps = 29/81 (35%)
 Frame = +3

Query: 3   DCSALQHLDFSANKYFGG---TLQATR-------------GRHPHHPS-----LWFALHH 119
           +CS+LQ+LD SANKYFG    TL   +             G  P  PS     L+ A +H
Sbjct: 241 ECSSLQYLDISANKYFGDISRTLSPCKNLLHLNVSGNQFTGPVPELPSGSLKFLYLAANH 300

Query: 120 FAGLYP--------TLVELDI 158
           F G  P        TLVELD+
Sbjct: 301 FFGKIPARLAELCSTLVELDL 321


>dbj|BAC99050.1| brassinosteroid receptor [Pisum sativum]
          Length = 1188

 Score = 48.9 bits (115), Expect(2) = 4e-11
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 16/88 (18%)
 Frame = +1

Query: 175 GPVS---GTFTSLESFEISCNRFTNELLVEVLTEMSRPRDLALSFN-------SSESRIA 324
           GPV    G  TS+ SF+IS N+F  EL +EVLTEM+  ++L ++FN        S S++ 
Sbjct: 328 GPVPREFGACTSVTSFDISSNKFAGELPMEVLTEMNSLKELTVAFNEFAGPLPESLSKLT 387

Query: 325 GSELECLCED------PKWLCSLPVGTD 390
           G E   L  +      P+WLC    G +
Sbjct: 388 GLESLDLSSNNFSGTIPRWLCGEESGNN 415



 Score = 43.5 bits (101), Expect(2) = 4e-11
 Identities = 34/81 (41%), Positives = 39/81 (48%), Gaps = 29/81 (35%)
 Frame = +3

Query: 3   DCSALQHLDFSANKYFGG---TLQATR-------------GRHPHHPS-----LWFALHH 119
           DCS+LQHLD SANKYFG    TL   +             G  P  PS     L+ A +H
Sbjct: 241 DCSSLQHLDISANKYFGDITRTLSPCKNLLHLNLSGNQFTGPVPSLPSGSLQFLYLAENH 300

Query: 120 FAGLYP--------TLVELDI 158
           FAG  P        TLVELD+
Sbjct: 301 FAGKIPARLADLCSTLVELDL 321


Top