BLASTX nr result

ID: Glycyrrhiza23_contig00033398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033398
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591531.1| Zinc finger CCCH domain-containing protein [...    87   1e-15
ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containin...    75   4e-12
emb|CBI36846.3| unnamed protein product [Vitis vinifera]               75   4e-12
ref|XP_002327858.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002523081.1| ATP-dependent RNA helicase, putative [Ricinu...    64   1e-08

>ref|XP_003591531.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355480579|gb|AES61782.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 1035

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 44/65 (67%), Positives = 50/65 (76%)
 Frame = +2

Query: 5    FILTESFAFDETSFGALYDRYTPRSPMVVSRSFSYVFNLCRPPTDKLFGDYAAAIKKQLH 184
            FILTESFAFDE SFG L+D  T R PMVVSRS SYVF+L +PPTD+L GDY A +K+ LH
Sbjct: 972  FILTESFAFDEISFGILHDSVTNRRPMVVSRSISYVFSL-QPPTDELCGDYVATMKRHLH 1030

Query: 185  KYPNN 199
            K   N
Sbjct: 1031 KIQKN 1035


>ref|XP_002267435.2| PREDICTED: zinc finger CCCH domain-containing protein 31 [Vitis
            vinifera]
          Length = 1014

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/60 (63%), Positives = 45/60 (75%)
 Frame = +2

Query: 5    FILTESFAFDETSFGALYDRYTPRSPMVVSRSFSYVFNLCRPPTDKLFGDYAAAIKKQLH 184
            F L  SF FDE+SFG L D+ T + PM+VSR+ SYVFNL +PPTD LFGDYA A  K+LH
Sbjct: 953  FFLKCSFPFDESSFGELTDKVTTKKPMLVSRATSYVFNL-QPPTDILFGDYATAFNKRLH 1011


>emb|CBI36846.3| unnamed protein product [Vitis vinifera]
          Length = 1007

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/60 (63%), Positives = 45/60 (75%)
 Frame = +2

Query: 5    FILTESFAFDETSFGALYDRYTPRSPMVVSRSFSYVFNLCRPPTDKLFGDYAAAIKKQLH 184
            F L  SF FDE+SFG L D+ T + PM+VSR+ SYVFNL +PPTD LFGDYA A  K+LH
Sbjct: 946  FFLKCSFPFDESSFGELTDKVTTKKPMLVSRATSYVFNL-QPPTDILFGDYATAFNKRLH 1004


>ref|XP_002327858.1| predicted protein [Populus trichocarpa] gi|222837267|gb|EEE75646.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/65 (52%), Positives = 43/65 (66%)
 Frame = +2

Query: 5   FILTESFAFDETSFGALYDRYTPRSPMVVSRSFSYVFNLCRPPTDKLFGDYAAAIKKQLH 184
           F L ESF FDE SFG + +  T R PM+VS+  SYVF + +PPTD  FG+YAA ++K LH
Sbjct: 160 FFLGESFPFDEESFGQMPNTVTTRKPMMVSKPISYVF-ILQPPTDVQFGNYAAILQKYLH 218

Query: 185 KYPNN 199
               N
Sbjct: 219 DVNGN 223


>ref|XP_002523081.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223537643|gb|EEF39266.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 1025

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/60 (56%), Positives = 39/60 (65%)
 Frame = +2

Query: 5    FILTESFAFDETSFGALYDRYTPRSPMVVSRSFSYVFNLCRPPTDKLFGDYAAAIKKQLH 184
            F L ESF FDE SFG L D    R PM  S++ SYVF+L +PPTD  F DYAA + K LH
Sbjct: 963  FFLGESFPFDEASFGELADGVRTRKPMPASKAISYVFDL-QPPTDIQFDDYAATLHKCLH 1021


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