BLASTX nr result

ID: Glycyrrhiza23_contig00033376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033376
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528006.1| conserved hypothetical protein [Ricinus comm...    87   1e-15
ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor ...    86   3e-15
ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor ...    86   3e-15
ref|XP_002330835.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor ...    82   3e-14

>ref|XP_002528006.1| conserved hypothetical protein [Ricinus communis]
           gi|223532632|gb|EEF34418.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1871

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 49/73 (67%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
 Frame = -3

Query: 217 SQDGLQKILGLLNDAALLRXXXXXXXXXXXXXXXXXNDRSS-EVLTSSEKQIAYHTCVAL 41
           +QDGLQK+LGLLNDAA +R                 NDRS  EVLTSSEKQIAYHTCVAL
Sbjct: 704 AQDGLQKLLGLLNDAAAVRSGVNSGALNLSGASALRNDRSPPEVLTSSEKQIAYHTCVAL 763

Query: 40  RQYFRAHLLLLMD 2
           RQYFRAHLLLL+D
Sbjct: 764 RQYFRAHLLLLLD 776


>ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
           max]
          Length = 1868

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 49/73 (67%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
 Frame = -3

Query: 217 SQDGLQKILGLLNDAALLRXXXXXXXXXXXXXXXXXNDRSS-EVLTSSEKQIAYHTCVAL 41
           S DGLQK+LGLLNDAA +R                 NDRSS EVLTSSEKQIAYHTCVAL
Sbjct: 677 SLDGLQKLLGLLNDAASVRSGVNSGALNLSNSGSLRNDRSSAEVLTSSEKQIAYHTCVAL 736

Query: 40  RQYFRAHLLLLMD 2
           RQYFRAHLL+L+D
Sbjct: 737 RQYFRAHLLVLVD 749


>ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
           max]
          Length = 1857

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 49/73 (67%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
 Frame = -3

Query: 217 SQDGLQKILGLLNDAALLRXXXXXXXXXXXXXXXXXNDRSS-EVLTSSEKQIAYHTCVAL 41
           S DGLQK+LGLLNDAA +R                 NDRSS EVLTSSEKQIAYHTCVAL
Sbjct: 666 SLDGLQKLLGLLNDAASVRSGVNSGALSLSNSGSLRNDRSSAEVLTSSEKQIAYHTCVAL 725

Query: 40  RQYFRAHLLLLMD 2
           RQYFRAHLL+L+D
Sbjct: 726 RQYFRAHLLVLVD 738


>ref|XP_002330835.1| predicted protein [Populus trichocarpa] gi|222872637|gb|EEF09768.1|
           predicted protein [Populus trichocarpa]
          Length = 1791

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 48/73 (65%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
 Frame = -3

Query: 217 SQDGLQKILGLLNDAALLRXXXXXXXXXXXXXXXXXNDRSS-EVLTSSEKQIAYHTCVAL 41
           +QDGL K+L LLNDAA +R                 NDRSS EVLTSSEKQIAYHTCVAL
Sbjct: 607 AQDGLHKLLTLLNDAASVRSGVNSGALNLSNSTALRNDRSSAEVLTSSEKQIAYHTCVAL 666

Query: 40  RQYFRAHLLLLMD 2
           RQYFRAHLLLL+D
Sbjct: 667 RQYFRAHLLLLVD 679


>ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Vitis
            vinifera]
          Length = 2024

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 47/73 (64%), Positives = 52/73 (71%), Gaps = 1/73 (1%)
 Frame = -3

Query: 217  SQDGLQKILGLLNDAALLRXXXXXXXXXXXXXXXXXNDRSS-EVLTSSEKQIAYHTCVAL 41
            +QDGLQK+L LL+DAA +R                 NDRS  EVLTSSEKQIAYHTCVAL
Sbjct: 812  AQDGLQKLLSLLHDAASVRSGVNSGGLGLSNSGSLRNDRSPPEVLTSSEKQIAYHTCVAL 871

Query: 40   RQYFRAHLLLLMD 2
            RQYFRAHLLLL+D
Sbjct: 872  RQYFRAHLLLLVD 884


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