BLASTX nr result
ID: Glycyrrhiza23_contig00033372
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00033372 (265 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003525951.1| PREDICTED: U-box domain-containing protein 3... 109 3e-22 ref|XP_003523628.1| PREDICTED: U-box domain-containing protein 3... 104 9e-21 ref|XP_003589041.1| U-box domain-containing protein [Medicago tr... 97 2e-18 ref|XP_002330821.1| predicted protein [Populus trichocarpa] gi|2... 96 4e-18 ref|XP_003545347.1| PREDICTED: U-box domain-containing protein 3... 95 5e-18 >ref|XP_003525951.1| PREDICTED: U-box domain-containing protein 30-like [Glycine max] Length = 425 Score = 109 bits (272), Expect = 3e-22 Identities = 55/78 (70%), Positives = 61/78 (78%) Frame = +2 Query: 32 VKDKKHPTGVLTGLILLKIICXXXXXXXXXXXXXXXPQLIELLPSLNNECLEIALCILEV 211 V+DKKHPT VLTGLILLKI+C PQLI+LLP+LNNECLEIAL ILEV Sbjct: 259 VRDKKHPTSVLTGLILLKIVCSREPVRSSIISIGAVPQLIQLLPTLNNECLEIALHILEV 318 Query: 212 LSTVPEGRVALKECPNII 265 LST+PEGR+ALKECPNII Sbjct: 319 LSTLPEGRLALKECPNII 336 >ref|XP_003523628.1| PREDICTED: U-box domain-containing protein 30-like [Glycine max] Length = 422 Score = 104 bits (259), Expect = 9e-21 Identities = 53/78 (67%), Positives = 60/78 (76%) Frame = +2 Query: 32 VKDKKHPTGVLTGLILLKIICXXXXXXXXXXXXXXXPQLIELLPSLNNECLEIALCILEV 211 V+DKKHPT V+TGLILLKI+ PQLI+LLP+LNNECLEIAL ILEV Sbjct: 256 VRDKKHPTSVVTGLILLKIVSSRESVRGSIISIGAVPQLIQLLPTLNNECLEIALHILEV 315 Query: 212 LSTVPEGRVALKECPNII 265 LST+PEGR+ALKECPNII Sbjct: 316 LSTLPEGRMALKECPNII 333 >ref|XP_003589041.1| U-box domain-containing protein [Medicago truncatula] gi|355478089|gb|AES59292.1| U-box domain-containing protein [Medicago truncatula] Length = 434 Score = 96.7 bits (239), Expect = 2e-18 Identities = 50/79 (63%), Positives = 58/79 (73%), Gaps = 1/79 (1%) Frame = +2 Query: 32 VKDKKHPTGVLTGLILLK-IICXXXXXXXXXXXXXXXPQLIELLPSLNNECLEIALCILE 208 V+DKKHP GVL GL LLK ++C PQLIE+LP+LNNECLEIAL ILE Sbjct: 267 VRDKKHPNGVLIGLTLLKKVLCCHESIRSSMISIGAIPQLIEILPNLNNECLEIALYILE 326 Query: 209 VLSTVPEGRVALKECPNII 265 VLST+ EG++ALKECPNII Sbjct: 327 VLSTLEEGKLALKECPNII 345 >ref|XP_002330821.1| predicted protein [Populus trichocarpa] gi|222872623|gb|EEF09754.1| predicted protein [Populus trichocarpa] Length = 448 Score = 95.5 bits (236), Expect = 4e-18 Identities = 49/78 (62%), Positives = 54/78 (69%) Frame = +2 Query: 32 VKDKKHPTGVLTGLILLKIICXXXXXXXXXXXXXXXPQLIELLPSLNNECLEIALCILEV 211 VKDK+HP GVL GL LL IC P L+ELLPSLNNECLE+AL ILEV Sbjct: 282 VKDKRHPNGVLAGLGLLNTICSDESLRSSVVSIGAVPPLVELLPSLNNECLELALYILEV 341 Query: 212 LSTVPEGRVALKECPNII 265 LSTVPEGR+ALK+C N I Sbjct: 342 LSTVPEGRLALKDCANTI 359 >ref|XP_003545347.1| PREDICTED: U-box domain-containing protein 30-like [Glycine max] Length = 421 Score = 95.1 bits (235), Expect = 5e-18 Identities = 54/81 (66%), Positives = 59/81 (72%), Gaps = 3/81 (3%) Frame = +2 Query: 32 VKDKKHPTGVLT-GLILLK--IICXXXXXXXXXXXXXXXPQLIELLPSLNNECLEIALCI 202 V+DKKHP GV++ GLILLK IIC P LIELLPSLNNECLE AL I Sbjct: 252 VRDKKHPNGVVSIGLILLKKAIICSHESVRSSLISLGAIPLLIELLPSLNNECLEKALYI 311 Query: 203 LEVLSTVPEGRVALKECPNII 265 LEVLST+PEGR+ALKECPNII Sbjct: 312 LEVLSTLPEGRMALKECPNII 332