BLASTX nr result

ID: Glycyrrhiza23_contig00033372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033372
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525951.1| PREDICTED: U-box domain-containing protein 3...   109   3e-22
ref|XP_003523628.1| PREDICTED: U-box domain-containing protein 3...   104   9e-21
ref|XP_003589041.1| U-box domain-containing protein [Medicago tr...    97   2e-18
ref|XP_002330821.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_003545347.1| PREDICTED: U-box domain-containing protein 3...    95   5e-18

>ref|XP_003525951.1| PREDICTED: U-box domain-containing protein 30-like [Glycine max]
          Length = 425

 Score =  109 bits (272), Expect = 3e-22
 Identities = 55/78 (70%), Positives = 61/78 (78%)
 Frame = +2

Query: 32  VKDKKHPTGVLTGLILLKIICXXXXXXXXXXXXXXXPQLIELLPSLNNECLEIALCILEV 211
           V+DKKHPT VLTGLILLKI+C               PQLI+LLP+LNNECLEIAL ILEV
Sbjct: 259 VRDKKHPTSVLTGLILLKIVCSREPVRSSIISIGAVPQLIQLLPTLNNECLEIALHILEV 318

Query: 212 LSTVPEGRVALKECPNII 265
           LST+PEGR+ALKECPNII
Sbjct: 319 LSTLPEGRLALKECPNII 336


>ref|XP_003523628.1| PREDICTED: U-box domain-containing protein 30-like [Glycine max]
          Length = 422

 Score =  104 bits (259), Expect = 9e-21
 Identities = 53/78 (67%), Positives = 60/78 (76%)
 Frame = +2

Query: 32  VKDKKHPTGVLTGLILLKIICXXXXXXXXXXXXXXXPQLIELLPSLNNECLEIALCILEV 211
           V+DKKHPT V+TGLILLKI+                PQLI+LLP+LNNECLEIAL ILEV
Sbjct: 256 VRDKKHPTSVVTGLILLKIVSSRESVRGSIISIGAVPQLIQLLPTLNNECLEIALHILEV 315

Query: 212 LSTVPEGRVALKECPNII 265
           LST+PEGR+ALKECPNII
Sbjct: 316 LSTLPEGRMALKECPNII 333


>ref|XP_003589041.1| U-box domain-containing protein [Medicago truncatula]
           gi|355478089|gb|AES59292.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 434

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 50/79 (63%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
 Frame = +2

Query: 32  VKDKKHPTGVLTGLILLK-IICXXXXXXXXXXXXXXXPQLIELLPSLNNECLEIALCILE 208
           V+DKKHP GVL GL LLK ++C               PQLIE+LP+LNNECLEIAL ILE
Sbjct: 267 VRDKKHPNGVLIGLTLLKKVLCCHESIRSSMISIGAIPQLIEILPNLNNECLEIALYILE 326

Query: 209 VLSTVPEGRVALKECPNII 265
           VLST+ EG++ALKECPNII
Sbjct: 327 VLSTLEEGKLALKECPNII 345


>ref|XP_002330821.1| predicted protein [Populus trichocarpa] gi|222872623|gb|EEF09754.1|
           predicted protein [Populus trichocarpa]
          Length = 448

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/78 (62%), Positives = 54/78 (69%)
 Frame = +2

Query: 32  VKDKKHPTGVLTGLILLKIICXXXXXXXXXXXXXXXPQLIELLPSLNNECLEIALCILEV 211
           VKDK+HP GVL GL LL  IC               P L+ELLPSLNNECLE+AL ILEV
Sbjct: 282 VKDKRHPNGVLAGLGLLNTICSDESLRSSVVSIGAVPPLVELLPSLNNECLELALYILEV 341

Query: 212 LSTVPEGRVALKECPNII 265
           LSTVPEGR+ALK+C N I
Sbjct: 342 LSTVPEGRLALKDCANTI 359


>ref|XP_003545347.1| PREDICTED: U-box domain-containing protein 30-like [Glycine max]
          Length = 421

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 54/81 (66%), Positives = 59/81 (72%), Gaps = 3/81 (3%)
 Frame = +2

Query: 32  VKDKKHPTGVLT-GLILLK--IICXXXXXXXXXXXXXXXPQLIELLPSLNNECLEIALCI 202
           V+DKKHP GV++ GLILLK  IIC               P LIELLPSLNNECLE AL I
Sbjct: 252 VRDKKHPNGVVSIGLILLKKAIICSHESVRSSLISLGAIPLLIELLPSLNNECLEKALYI 311

Query: 203 LEVLSTVPEGRVALKECPNII 265
           LEVLST+PEGR+ALKECPNII
Sbjct: 312 LEVLSTLPEGRMALKECPNII 332


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