BLASTX nr result

ID: Glycyrrhiza23_contig00033364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033364
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601416.1| TIR-NBS-LRR-TIR type disease resistance prot...   224   4e-57
ref|XP_003601415.1| Tir-nbs-lrr resistance protein [Medicago tru...   224   4e-57
gb|ABD33309.1| Ribonuclease H [Medicago truncatula]                   139   2e-31
ref|XP_003625075.1| TMV resistance protein N [Medicago truncatul...   139   2e-31
ref|XP_003545198.1| PREDICTED: TMV resistance protein N-like [Gl...   121   7e-26

>ref|XP_003601416.1| TIR-NBS-LRR-TIR type disease resistance protein [Medicago truncatula]
            gi|355490464|gb|AES71667.1| TIR-NBS-LRR-TIR type disease
            resistance protein [Medicago truncatula]
          Length = 1743

 Score =  224 bits (572), Expect = 4e-57
 Identities = 114/147 (77%), Positives = 124/147 (84%), Gaps = 1/147 (0%)
 Frame = +3

Query: 3    NLKSLRGLNISGCSKICSLPEDINQNMALEDLDLSRTAIRELDPSVLQLGNLKRLSLNSC 182
            NLKSLR LNISGCSKIC+LP+ INQ MALED+DLSRTAIR+LDPS+LQLGNLKRLSL SC
Sbjct: 739  NLKSLRILNISGCSKICNLPDGINQIMALEDIDLSRTAIRDLDPSLLQLGNLKRLSLRSC 798

Query: 183  SGPACNSKWDLHLPFGNKFRFFPAH-TGLILPPFVSGLSSLNVLDLSYCNLTDDSIPHDI 359
              PA NS W+ HLPFG KF FFPA  T L LPPF+SGLSSL  LDLS CNLTD SIPHDI
Sbjct: 799  RDPATNSSWNFHLPFGKKFSFFPAQTTSLTLPPFLSGLSSLTELDLSDCNLTDSSIPHDI 858

Query: 360  GCLSSLERLILSGNNFIRLPAYCIANL 440
             CLSSLERLILSGNNF+ LP + I+NL
Sbjct: 859  DCLSSLERLILSGNNFVCLPTHYISNL 885


>ref|XP_003601415.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
           gi|355490463|gb|AES71666.1| Tir-nbs-lrr resistance
           protein [Medicago truncatula]
          Length = 1289

 Score =  224 bits (572), Expect = 4e-57
 Identities = 114/147 (77%), Positives = 124/147 (84%), Gaps = 1/147 (0%)
 Frame = +3

Query: 3   NLKSLRGLNISGCSKICSLPEDINQNMALEDLDLSRTAIRELDPSVLQLGNLKRLSLNSC 182
           NLKSLR LNISGCSKIC+LP+ INQ MALED+DLSRTAIR+LDPS+LQLGNLKRLSL SC
Sbjct: 62  NLKSLRILNISGCSKICNLPDGINQIMALEDIDLSRTAIRDLDPSLLQLGNLKRLSLRSC 121

Query: 183 SGPACNSKWDLHLPFGNKFRFFPAH-TGLILPPFVSGLSSLNVLDLSYCNLTDDSIPHDI 359
             PA NS W+ HLPFG KF FFPA  T L LPPF+SGLSSL  LDLS CNLTD SIPHDI
Sbjct: 122 RDPATNSSWNFHLPFGKKFSFFPAQTTNLTLPPFLSGLSSLTELDLSDCNLTDSSIPHDI 181

Query: 360 GCLSSLERLILSGNNFIRLPAYCIANL 440
            CLSSLERLILSGNNF+ LP + +ANL
Sbjct: 182 DCLSSLERLILSGNNFVCLPTHHLANL 208



 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/78 (62%), Positives = 58/78 (74%)
 Frame = +3

Query: 3    NLKSLRGLNISGCSKICSLPEDINQNMALEDLDLSRTAIRELDPSVLQLGNLKRLSLNSC 182
            NLKSL+ LNI GCSK+CSLP+ I QN AL+DL+ SRTA+ E DPS+ QL NLKRLSL+ C
Sbjct: 909  NLKSLKILNILGCSKLCSLPDGIKQNTALQDLNFSRTAVGEFDPSLFQLENLKRLSLSGC 968

Query: 183  SGPACNSKWDLHLPFGNK 236
              P  NS  DL LP+  K
Sbjct: 969  GWPGSNSGRDLILPYDFK 986


>gb|ABD33309.1| Ribonuclease H [Medicago truncatula]
          Length = 1378

 Score =  139 bits (350), Expect = 2e-31
 Identities = 81/147 (55%), Positives = 100/147 (68%), Gaps = 2/147 (1%)
 Frame = +3

Query: 6    LKSLRGLNISGCSKICSLPEDINQNMALEDLDLSRTAIRELDPSVLQLGNLKRLSLNSCS 185
            LKSL+ LN+SGCSK   LP+++++N ALE L++S TAIRE+  S++ L NL  L  + C 
Sbjct: 627  LKSLKRLNLSGCSKFSKLPDNLHENEALECLNVSNTAIREVPSSIVHLKNLISLLFHGCK 686

Query: 186  GPACNSKWDLHLPFGNKFRF--FPAHTGLILPPFVSGLSSLNVLDLSYCNLTDDSIPHDI 359
            G A NS+  L LP G  F F   P    LILP F SGLSSL  LDLSYCNL D+SIP D+
Sbjct: 687  GLARNSESSL-LPLGRIFGFGTHPTPKKLILPSF-SGLSSLKKLDLSYCNLYDESIPDDL 744

Query: 360  GCLSSLERLILSGNNFIRLPAYCIANL 440
            GCLSSL  L +SGNNF+ L   CI+ L
Sbjct: 745  GCLSSLVTLDISGNNFVNLRDGCISKL 771


>ref|XP_003625075.1| TMV resistance protein N [Medicago truncatula]
            gi|355500090|gb|AES81293.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1579

 Score =  139 bits (350), Expect = 2e-31
 Identities = 81/147 (55%), Positives = 100/147 (68%), Gaps = 2/147 (1%)
 Frame = +3

Query: 6    LKSLRGLNISGCSKICSLPEDINQNMALEDLDLSRTAIRELDPSVLQLGNLKRLSLNSCS 185
            LKSL+ LN+SGCSK   LP+++++N ALE L++S TAIRE+  S++ L NL  L  + C 
Sbjct: 810  LKSLKRLNLSGCSKFSKLPDNLHENEALECLNVSNTAIREVPSSIVHLKNLISLLFHGCK 869

Query: 186  GPACNSKWDLHLPFGNKFRF--FPAHTGLILPPFVSGLSSLNVLDLSYCNLTDDSIPHDI 359
            G A NS+  L LP G  F F   P    LILP F SGLSSL  LDLSYCNL D+SIP D+
Sbjct: 870  GLARNSESSL-LPLGRIFGFGTHPTPKKLILPSF-SGLSSLKKLDLSYCNLYDESIPDDL 927

Query: 360  GCLSSLERLILSGNNFIRLPAYCIANL 440
            GCLSSL  L +SGNNF+ L   CI+ L
Sbjct: 928  GCLSSLVTLDISGNNFVNLRDGCISKL 954


>ref|XP_003545198.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1127

 Score =  121 bits (303), Expect = 7e-26
 Identities = 73/146 (50%), Positives = 93/146 (63%)
 Frame = +3

Query: 3    NLKSLRGLNISGCSKICSLPEDINQNMALEDLDLSRTAIRELDPSVLQLGNLKRLSLNSC 182
            NLKSLR L+I GCSK  +LP  +N+N +LE+LD+S T IRE+  S + L NLK LS    
Sbjct: 746  NLKSLRKLSICGCSKFSTLPNSMNENGSLEELDVSGTPIREITSSKVCLENLKELSFGGR 805

Query: 183  SGPACNSKWDLHLPFGNKFRFFPAHTGLILPPFVSGLSSLNVLDLSYCNLTDDSIPHDIG 362
            +  A NS W+LH    +  R       LILP  +S L+SL  L+LSYC+L D+SIP  +G
Sbjct: 806  NELASNSLWNLHQRI-SMHRRQQVPKELILPT-LSRLTSLKFLNLSYCDLNDESIPDSLG 863

Query: 363  CLSSLERLILSGNNFIRLPAYCIANL 440
             L SL  L LSGNNF+  P  CI+NL
Sbjct: 864  SLLSLLGLNLSGNNFVSPPTRCISNL 889


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