BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033340
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD33209.1| Ribonuclease H [Medicago truncatula]                    57   2e-06
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...    57   2e-06
emb|CAN67514.1| hypothetical protein VITISV_012081 [Vitis vinifera]    56   4e-06
ref|XP_003543094.1| PREDICTED: putative ribonuclease H protein A...    55   5e-06
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...    55   5e-06

>gb|ABD33209.1| Ribonuclease H [Medicago truncatula]
          Length = 302

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 22/48 (45%), Positives = 32/48 (66%)
 Frame = +2

Query: 134 IKWQKPNDGWYKMNCDGAVMNYGGKASCGAVLRSDNGSFIFGYAASLG 277
           I W++P DGW K+NCDGA    G  A CG +LR  +G++I G++  +G
Sbjct: 200 IDWKRPLDGWVKLNCDGACKGNGELAGCGGLLRQSDGTWIKGFSRKIG 247


>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
 Frame = +2

Query: 41  RIKHQAISISQSFREHVSTSRRVHALSGNRE---IKWQKPNDGWYKMNCDGAVMNYGGKA 211
           R  +  + I +  RE    ++ VH  S  +E   I W +P  GW K+NCDGA    G  A
Sbjct: 592 RPSNPTLVIQKFTREIEDNTKLVHKSSHQKETIYIGWMRPPFGWVKLNCDGAWKGSGTLA 651

Query: 212 SCGAVLRSDNGSFIFGYAASLG 277
            CG +LR  +G +I GY   +G
Sbjct: 652 GCGGLLRDSDGRWIKGYFKKIG 673


>emb|CAN67514.1| hypothetical protein VITISV_012081 [Vitis vinifera]
          Length = 697

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 23/55 (41%), Positives = 34/55 (61%)
 Frame = +2

Query: 131 EIKWQKPNDGWYKMNCDGAVMNYGGKASCGAVLRSDNGSFIFGYAASLGPLIYTL 295
           ++ W+KP  GW K+N DG+     G+AS G V+R  N +F+ GYA S+G    T+
Sbjct: 470 QVAWEKPQIGWTKLNFDGSCKCSSGRASIGGVIRDHNAAFLLGYAESIGHAXSTI 524


>ref|XP_003543094.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 201

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 23/48 (47%), Positives = 31/48 (64%)
 Frame = +2

Query: 134 IKWQKPNDGWYKMNCDGAVMNYGGKASCGAVLRSDNGSFIFGYAASLG 277
           + W+KP  GW K+N DG+     GKAS G V+R+ N  F+ GYA S+G
Sbjct: 32  VAWKKPRIGWTKLNFDGSCKCLSGKASIGGVVRNHNAEFLLGYAESIG 79


>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
 Frame = +2

Query: 80  REHVSTSRRVHALSGN---------REIKWQKPNDGWYKMNCDGAVMNYGGKASCGAVLR 232
           R+  S   + H + GN         R + W KP +GW K+N DGA     G A+ G +LR
Sbjct: 597 RDRASEVIQAHLVEGNSGKIRGRIERMVSWVKPAEGWLKLNTDGASKGNPGLATAGGILR 656

Query: 233 SDNGSFIFGYAASLG 277
             +GS+I G+A ++G
Sbjct: 657 QQDGSWIGGFAVNIG 671