BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033306
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat...   183   1e-44
ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat...   179   3e-43
ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat...   176   1e-42
ref|XP_003629614.1| Pentatricopeptide repeat-containing protein ...   176   1e-42
ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat...   174   9e-42

>ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  183 bits (465), Expect = 1e-44
 Identities = 94/146 (64%), Positives = 110/146 (75%), Gaps = 2/146 (1%)
 Frame = -3

Query: 432 DTAGAVRCLRNMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTY 253
           DT+GA+ CL+ M ++N  PNVVVYNAI+DGLCK GLV EAL L  EM     + P V TY
Sbjct: 195 DTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGV-VNVEPNVVTY 253

Query: 252 NCLIQGLCN-IGSRKSAASMLNEMM-QKGIMPDVQTFSILVDGFCKEGLVLGARSVISFM 79
           NCLIQGLC   G  +    + NEM+ +KGI+PDVQTFSILVDGFCKEGL+L A SV+ FM
Sbjct: 254 NCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFM 313

Query: 78  VHMGEEPNVVTYNSLIGGYCLVNQME 1
           V +G EPNVVTYNSLI GYCL +QME
Sbjct: 314 VRIGVEPNVVTYNSLIAGYCLRSQME 339



 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/127 (40%), Positives = 74/127 (58%)
 Frame = -3

Query: 399 MAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLIQGLCNIG 220
           M +   EP +V  N I++GLC +G V+ AL L  +M ++ G H    TY  L+ GLC IG
Sbjct: 136 MTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKM-ENLGYHCNARTYGALVNGLCKIG 194

Query: 219 SRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEEPNVVTYN 40
               A   L +M+++ + P+V  ++ ++DG CK GLV  A  ++  M  +  EPNVVTYN
Sbjct: 195 DTSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYN 254

Query: 39  SLIGGYC 19
            LI G C
Sbjct: 255 CLIQGLC 261



 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
 Frame = -3

Query: 399 MAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEM-SDDKGIHPTVSTYNCLIQGLCNI 223
           M     EPNVV YN+++ G C    + EA+ +F  M  + +G  P+V T+N LI G C +
Sbjct: 313 MVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKV 372

Query: 222 GSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEEPNVVTY 43
                A S+L+EM+ KG+ PDV T++ L+ GFC+    L AR +   M   G+ PN+ T 
Sbjct: 373 KEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTC 432

Query: 42  NSLIGG 25
             ++ G
Sbjct: 433 AVVLDG 438



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 41/125 (32%), Positives = 66/125 (52%)
 Frame = -3

Query: 399 MAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLIQGLCNIG 220
           M E    PN+     ++DGL K  L SEA+ LF  M    G+   +  YN ++ G+C +G
Sbjct: 420 MKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKS-GLDLDIVIYNIMLDGMCKMG 478

Query: 219 SRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEEPNVVTYN 40
               A  +L+ ++ KG+  D  T++I++ G C+EGL+  A  ++  M   G  PN  +YN
Sbjct: 479 KLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYN 538

Query: 39  SLIGG 25
             + G
Sbjct: 539 VFVQG 543



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 35/159 (22%)
 Frame = -3

Query: 390 KNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLIQGLCNIGSRK 211
           + C P+VV +N+++ G CK   V +A++L +EM   KG+ P V T+  LI G C +    
Sbjct: 353 EGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVG-KGLDPDVFTWTSLIGGFCEVKKPL 411

Query: 210 SAASMLNEMMQKGIMPDVQT-----------------------------------FSILV 136
           +A  +   M + G +P++QT                                   ++I++
Sbjct: 412 AARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIML 471

Query: 135 DGFCKEGLVLGARSVISFMVHMGEEPNVVTYNSLIGGYC 19
           DG CK G +  AR ++S ++  G + +  TYN +I G C
Sbjct: 472 DGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLC 510



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 37/130 (28%), Positives = 67/130 (51%)
 Frame = -3

Query: 420 AVRCLRNMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLI 241
           AV   R M +   + ++V+YN ++DG+CK G +++A  L + +   KG+     TYN +I
Sbjct: 448 AVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLV-KGLKIDSYTYNIMI 506

Query: 240 QGLCNIGSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEE 61
           +GLC  G    A  +L +M + G  P+  ++++ V G  ++  +  +R  +  M   G  
Sbjct: 507 KGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFP 566

Query: 60  PNVVTYNSLI 31
            +  T   LI
Sbjct: 567 VDATTAELLI 576


>ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 567

 Score =  179 bits (453), Expect = 3e-43
 Identities = 91/146 (62%), Positives = 111/146 (76%), Gaps = 2/146 (1%)
 Frame = -3

Query: 432 DTAGAVRCLRNMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTY 253
           DT+GA+  L+ M ++N EPNVVVYNAI+DGLCK GLV EAL LF EM     + P V TY
Sbjct: 168 DTSGALESLKKMVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGV-VNVEPNVVTY 226

Query: 252 NCLIQGLCN-IGSRKSAASMLNEMM-QKGIMPDVQTFSILVDGFCKEGLVLGARSVISFM 79
           NCLIQGLC  +G  +    + NEM+ +KGI+PDVQTFSILV+GFCKEGL+L A S++ FM
Sbjct: 227 NCLIQGLCGEVGGWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFM 286

Query: 78  VHMGEEPNVVTYNSLIGGYCLVNQME 1
           + +G E NVVTYNSLI GYCL N+ME
Sbjct: 287 IRIGVELNVVTYNSLISGYCLRNRME 312



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 1/120 (0%)
 Frame = -3

Query: 381 EPNVVVYNAIMDGLCKDGLVSEALNLFTEM-SDDKGIHPTVSTYNCLIQGLCNIGSRKSA 205
           E NVV YN+++ G C    + EA+ +F  M  + +G  P+V TYN LI G C +     A
Sbjct: 292 ELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKA 351

Query: 204 ASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEEPNVVTYNSLIGG 25
            S+L+EM+ KG+ PDV T++ L+ GF + G  L A+ +   M   G+ P + T   ++ G
Sbjct: 352 MSLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDG 411



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 9/128 (7%)
 Frame = -3

Query: 375 NVVVYNAIMDGLC---KDGLVSEALNLFTEMSDDKGIHPTVSTYN------CLIQGLCNI 223
           +V   N +++ LC   K  L    L L T++    G+ PT+ T N      C++ GLC I
Sbjct: 111 DVCTLNILINCLCRLRKTTLGFAVLGLMTKI----GLEPTLVTLNTIANGLCIVNGLCKI 166

Query: 222 GSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEEPNVVTY 43
           G    A   L +M+++ + P+V  ++ ++DG CK GLV  A  +   M  +  EPNVVTY
Sbjct: 167 GDTSGALESLKKMVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTY 226

Query: 42  NSLIGGYC 19
           N LI G C
Sbjct: 227 NCLIQGLC 234



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 13/149 (8%)
 Frame = -3

Query: 411 CLRNMAEK-------------NCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIH 271
           CLRN  E+              C P+VV YN+++ G CK   V++A++L +EM   KG+ 
Sbjct: 306 CLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVG-KGLD 364

Query: 270 PTVSTYNCLIQGLCNIGSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSV 91
           P V T+  LI G   +G   +A  +   M  +G +P +QT ++++DG  K  L   A ++
Sbjct: 365 PDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTL 424

Query: 90  ISFMVHMGEEPNVVTYNSLIGGYCLVNQM 4
              M   G + ++V YN ++ G C + ++
Sbjct: 425 FRAMEKSGLDLDIVIYNIMLDGMCKMGKL 453



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/125 (31%), Positives = 67/125 (53%)
 Frame = -3

Query: 399 MAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLIQGLCNIG 220
           M ++   P +     ++DGL K  L SEA+ LF  M +  G+   +  YN ++ G+C +G
Sbjct: 393 MKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAM-EKSGLDLDIVIYNIMLDGMCKMG 451

Query: 219 SRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEEPNVVTYN 40
               A  +L+ ++ KG+  D  T++I++ G C+EGL+  A  ++  M   G  PN  +YN
Sbjct: 452 KLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYN 511

Query: 39  SLIGG 25
             + G
Sbjct: 512 VFVQG 516



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/130 (26%), Positives = 67/130 (51%)
 Frame = -3

Query: 420 AVRCLRNMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLI 241
           A+   R M +   + ++V+YN ++DG+CK G +++A  L + +   KG+     T+N +I
Sbjct: 421 AMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLV-KGLKIDSYTWNIMI 479

Query: 240 QGLCNIGSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEE 61
           +GLC  G    A  +L +M + G  P+  ++++ V G  ++  +  +R  +  M   G  
Sbjct: 480 KGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKGFP 539

Query: 60  PNVVTYNSLI 31
            +  T   LI
Sbjct: 540 VDATTAELLI 549


>ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  176 bits (447), Expect = 1e-42
 Identities = 90/143 (62%), Positives = 108/143 (75%)
 Frame = -3

Query: 432 DTAGAVRCLRNMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTY 253
           DT  AV  LR M E+N +PNVVVY+ IMDGLCKDGLVSEALNL +EM+  KG+ P + TY
Sbjct: 197 DTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNG-KGVRPNLVTY 255

Query: 252 NCLIQGLCNIGSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVH 73
            CLIQGLCN G  K A S+L+EMM+ G+ PD+Q  +ILVD FCKEG V+ A+SVI FM+ 
Sbjct: 256 ACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMIL 315

Query: 72  MGEEPNVVTYNSLIGGYCLVNQM 4
            GE P+V TYNSLI  YCL N+M
Sbjct: 316 TGEGPDVFTYNSLIHIYCLQNKM 338



 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 50/131 (38%), Positives = 72/131 (54%), Gaps = 1/131 (0%)
 Frame = -3

Query: 408 LRNMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPT-VSTYNCLIQGL 232
           L  M +   EP V+    +++GLC  G V++A+ L   M  +K  +P  V TY  LI GL
Sbjct: 135 LGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHM--EKMWYPLDVYTYGVLINGL 192

Query: 231 CNIGSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEEPNV 52
           C  G   +A   L +M ++   P+V  +S ++DG CK+GLV  A ++ S M   G  PN+
Sbjct: 193 CKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNL 252

Query: 51  VTYNSLIGGYC 19
           VTY  LI G C
Sbjct: 253 VTYACLIQGLC 263



 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 45/139 (32%), Positives = 78/139 (56%)
 Frame = -3

Query: 420 AVRCLRNMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLI 241
           A+R    M  +   P++VV+ +++ G CKD  +++A++L  EMS   G  P V+T+  LI
Sbjct: 341 AMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSK-MGFVPDVATWTTLI 399

Query: 240 QGLCNIGSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEE 61
            G C  G   +A  +   M + G +P++QT ++++DG CKE L+  A S+   M     +
Sbjct: 400 GGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLD 459

Query: 60  PNVVTYNSLIGGYCLVNQM 4
            N+V Y+ L+ G C   ++
Sbjct: 460 LNIVIYSILLDGMCSAGKL 478



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 42/130 (32%), Positives = 69/130 (53%)
 Frame = -3

Query: 408 LRNMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLIQGLC 229
           L  M +    P++ + N ++D  CK+G V +A ++   M    G  P V TYN LI   C
Sbjct: 275 LDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILT-GEGPDVFTYNSLIHIYC 333

Query: 228 NIGSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEEPNVV 49
                  A  + + M+ +G +PD+  F+ L+ G+CK+  +  A  ++  M  MG  P+V 
Sbjct: 334 LQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVA 393

Query: 48  TYNSLIGGYC 19
           T+ +LIGG+C
Sbjct: 394 TWTTLIGGFC 403



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/126 (30%), Positives = 68/126 (53%)
 Frame = -3

Query: 402 NMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLIQGLCNI 223
           NM +    PN+     I+DGLCK+ L+SEA++L   M +   +   +  Y+ L+ G+C+ 
Sbjct: 417 NMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAM-EKSNLDLNIVIYSILLDGMCSA 475

Query: 222 GSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEEPNVVTY 43
           G   +A  + + +  KG+  +V  ++I++ G CK+G +  A  ++  M   G  PN  TY
Sbjct: 476 GKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTY 535

Query: 42  NSLIGG 25
           N  + G
Sbjct: 536 NVFVQG 541



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 36/130 (27%), Positives = 66/130 (50%)
 Frame = -3

Query: 420 AVRCLRNMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLI 241
           AV   + M + N + N+V+Y+ ++DG+C  G ++ A  LF+ +   KG+   V  Y  +I
Sbjct: 446 AVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPG-KGLQINVYIYTIMI 504

Query: 240 QGLCNIGSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEE 61
           +GLC  GS   A  +L  M + G +P+  T+++ V G   +  +  +   ++ M   G  
Sbjct: 505 KGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFS 564

Query: 60  PNVVTYNSLI 31
            +  T   +I
Sbjct: 565 VDAATTEFII 574



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 37/134 (27%), Positives = 59/134 (44%)
 Frame = -3

Query: 420 AVRCLRNMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLI 241
           A+   + MA     P+V  +  ++  + +    + A++L   M    GI     T N +I
Sbjct: 60  ALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADTITLNIVI 119

Query: 240 QGLCNIGSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEE 61
             LC +       S+L  M + G+ P V T + L++G C +G V  A  +   M  M   
Sbjct: 120 NCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYP 179

Query: 60  PNVVTYNSLIGGYC 19
            +V TY  LI G C
Sbjct: 180 LDVYTYGVLINGLC 193



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 4/136 (2%)
 Frame = -3

Query: 411 CLRNMAEKNCEPNVVVYNAIMDGLCKDGL---VSEALNLFTEMSDDKGIHPTVSTYNCLI 241
           C  N  +     N       M  LC  G    + EAL+LF  M+  K + P+V  +  L+
Sbjct: 25  CSTNTDDTESHSNGTQLLISMRNLCWSGKLKNIDEALDLFQGMARMKPL-PSVKDFTLLL 83

Query: 240 QGLCNIGSRKSAASMLNEMMQK-GIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGE 64
             +  +    +A S++  M    GI  D  T +I+++  C+  LV    SV+  M  +G 
Sbjct: 84  GAIVRLKHYTTAISLVKHMFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGL 143

Query: 63  EPNVVTYNSLIGGYCL 16
           EP V+T  +LI G C+
Sbjct: 144 EPTVMTLTTLINGLCV 159


>ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355523636|gb|AET04090.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  176 bits (447), Expect = 1e-42
 Identities = 89/143 (62%), Positives = 108/143 (75%)
 Frame = -3

Query: 429 TAGAVRCLRNMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYN 250
           T+ AV  LR M E+N  PNVVVY+ +MDGLCKDGLVSEAL L  EMS  KGI P + TY 
Sbjct: 197 TSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSG-KGIKPNLVTYT 255

Query: 249 CLIQGLCNIGSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHM 70
           CLIQGLCN G  K A S+L+EMM+ G+MPD+Q+ +ILVD  CKEG ++ A+SVI FM+ +
Sbjct: 256 CLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILV 315

Query: 69  GEEPNVVTYNSLIGGYCLVNQME 1
           GE P+V TYNSLI  YCL NQM+
Sbjct: 316 GEVPDVFTYNSLIDRYCLQNQMD 338



 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 48/130 (36%), Positives = 69/130 (53%)
 Frame = -3

Query: 408 LRNMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLIQGLC 229
           L  M +   EP+VV +  +++GLC  G V  A+ L   + +  G    V TY  LI GLC
Sbjct: 134 LGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHV-EKTGYRSDVKTYGVLINGLC 192

Query: 228 NIGSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEEPNVV 49
            +G    A   L +M ++   P+V  +S ++DG CK+GLV  A  +   M   G +PN+V
Sbjct: 193 KMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLV 252

Query: 48  TYNSLIGGYC 19
           TY  LI G C
Sbjct: 253 TYTCLIQGLC 262



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/139 (30%), Positives = 74/139 (53%)
 Frame = -3

Query: 420 AVRCLRNMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLI 241
           A R    M  + C P++V Y +++ G CK   +++A++L  EM    G  P V T+  LI
Sbjct: 340 ATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIK-VGFTPDVVTWTTLI 398

Query: 240 QGLCNIGSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEE 61
            G C +G   +A  +   M + G +P++QT +I++DG CK  L+  A S+   M     +
Sbjct: 399 GGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLD 458

Query: 60  PNVVTYNSLIGGYCLVNQM 4
            N+V Y+ ++ G C   ++
Sbjct: 459 LNIVIYSIILDGMCSAGKL 477



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 41/120 (34%), Positives = 65/120 (54%)
 Frame = -3

Query: 378 PNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLIQGLCNIGSRKSAAS 199
           P+V  YN+++D  C    + EA  +F E+   +G  P +  Y  LI G C I +   A  
Sbjct: 319 PDVFTYNSLIDRYCLQNQMDEATRVF-ELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMH 377

Query: 198 MLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEEPNVVTYNSLIGGYC 19
           +L+EM++ G  PDV T++ L+ GFC+ G  L A+ +   M   G+ PN+ T   ++ G C
Sbjct: 378 LLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLC 437



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/126 (32%), Positives = 71/126 (56%)
 Frame = -3

Query: 402 NMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLIQGLCNI 223
           NM +    PN+     I+DGLCK  L+SEAL+LF  M +   +   +  Y+ ++ G+C+ 
Sbjct: 416 NMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAM-EKSNLDLNIVIYSIILDGMCSA 474

Query: 222 GSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEEPNVVTY 43
           G   +A  + + +  KG+  +V  ++I+++GF K+GL+  A  ++S M   G  P+  TY
Sbjct: 475 GKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTY 534

Query: 42  NSLIGG 25
           N  + G
Sbjct: 535 NVFVQG 540



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 42/134 (31%), Positives = 71/134 (52%)
 Frame = -3

Query: 408 LRNMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLIQGLC 229
           L  M +    P++   N ++D LCK+G + +A ++   M    G  P V TYN LI   C
Sbjct: 274 LDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMIL-VGEVPDVFTYNSLIDRYC 332

Query: 228 NIGSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEEPNVV 49
                  A  +   M+ +G +PD+  ++ L+ G+CK   +  A  ++  M+ +G  P+VV
Sbjct: 333 LQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVV 392

Query: 48  TYNSLIGGYCLVNQ 7
           T+ +LIGG+C V +
Sbjct: 393 TWTTLIGGFCQVGR 406



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 41/134 (30%), Positives = 67/134 (50%)
 Frame = -3

Query: 420 AVRCLRNMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLI 241
           A+     MA+ N  P+V+ +  ++  + K    + A++L  EM    GI P     N +I
Sbjct: 59  ALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVI 118

Query: 240 QGLCNIGSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEE 61
             LC++       S+L  M++ G+ P V TF+IL++G C +G V  A  ++  +   G  
Sbjct: 119 NSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYR 178

Query: 60  PNVVTYNSLIGGYC 19
            +V TY  LI G C
Sbjct: 179 SDVKTYGVLINGLC 192



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/138 (28%), Positives = 66/138 (47%)
 Frame = -3

Query: 420 AVRCLRNMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLI 241
           A+     M + N + N+V+Y+ I+DG+C  G ++ AL LF+ +   KG+   V  Y  +I
Sbjct: 445 ALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPA-KGLQINVYAYTIMI 503

Query: 240 QGLCNIGSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEE 61
            G    G    A  +L+ M + G MPD  T+++ V G   E  +  +   ++ M   G  
Sbjct: 504 NGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFS 563

Query: 60  PNVVTYNSLIGGYCLVNQ 7
            +  T   +I  Y   NQ
Sbjct: 564 VDATTTEMII-NYLSTNQ 580



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
 Frame = -3

Query: 351 MDGLCKDGL---VSEALNLFTEMSDDKGIHPTVSTYNCLIQGLCNIGSRKSAASMLNEMM 181
           M   CK G    + EALN F  M+    + P+V  +  L+  +  +    +A S++ EM 
Sbjct: 44  MRNQCKSGKLKSIDEALNFFHTMAKMNPL-PSVIDFTLLLGFIVKMKHYTTAISLVKEMH 102

Query: 180 QK-GIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEEPNVVTYNSLIGGYCL 16
              GI PD    +++++  C   LV    SV+  M+ +G EP+VVT+  LI G C+
Sbjct: 103 SSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCV 158


>ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  174 bits (440), Expect = 9e-42
 Identities = 89/143 (62%), Positives = 107/143 (74%)
 Frame = -3

Query: 432 DTAGAVRCLRNMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTY 253
           DT  AV  LR M E+N +PNVVVY+ IMDGLCKDGLVSEALNL +EMS  KG+ P + TY
Sbjct: 197 DTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSG-KGVRPNLVTY 255

Query: 252 NCLIQGLCNIGSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVH 73
            CLIQGLCN G  K   S+L+EM++ G+  D+QT +ILVD FCKEG V+ A+SVI FM+ 
Sbjct: 256 ACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMIL 315

Query: 72  MGEEPNVVTYNSLIGGYCLVNQM 4
            GE P+V TYNSLI  YCL N+M
Sbjct: 316 TGEGPDVFTYNSLIHIYCLQNKM 338



 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 51/131 (38%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
 Frame = -3

Query: 408 LRNMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPT-VSTYNCLIQGL 232
           L  M +   EP V+   A+++GLC  G V++A+ L   M  +K  +P  V TY  LI GL
Sbjct: 135 LGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHM--EKMRYPLDVYTYGVLINGL 192

Query: 231 CNIGSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEEPNV 52
           C  G   +A   L +M ++   P+V  +S ++DG CK+GLV  A ++ S M   G  PN+
Sbjct: 193 CKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNL 252

Query: 51  VTYNSLIGGYC 19
           VTY  LI G C
Sbjct: 253 VTYACLIQGLC 263



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/139 (30%), Positives = 76/139 (54%)
 Frame = -3

Query: 420 AVRCLRNMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLI 241
           A+R    M  + C P++VV+ +++ G CKD  +++ ++L  EM+   G  P V T+  LI
Sbjct: 341 AMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAK-MGFVPDVVTWTTLI 399

Query: 240 QGLCNIGSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEE 61
            G C  G   +A  +   M + G +P++QT ++++DG CK  L+  A S+   M     +
Sbjct: 400 GGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLD 459

Query: 60  PNVVTYNSLIGGYCLVNQM 4
            N+V Y+ L+ G C   ++
Sbjct: 460 LNIVIYSILLDGMCSAGKL 478



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/126 (30%), Positives = 68/126 (53%)
 Frame = -3

Query: 402 NMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLIQGLCNI 223
           NM +    PN+     I+DGLCK  L+SEA++L  E  +   +   +  Y+ L+ G+C+ 
Sbjct: 417 NMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSL-AEAMEKSNLDLNIVIYSILLDGMCSA 475

Query: 222 GSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEEPNVVTY 43
           G   +A  + + +  KG+  +V T++I++ G CK+G +  A  ++  M   G  P+  TY
Sbjct: 476 GKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTY 535

Query: 42  NSLIGG 25
           N  + G
Sbjct: 536 NVFVQG 541



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 41/130 (31%), Positives = 67/130 (51%)
 Frame = -3

Query: 408 LRNMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLIQGLC 229
           L  M +     ++   N ++D  CK+G V +A ++   M    G  P V TYN LI   C
Sbjct: 275 LDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILT-GEGPDVFTYNSLIHIYC 333

Query: 228 NIGSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEEPNVV 49
                  A  + + M+ +G +PD+  F+ L+ G+CK+  +     ++  M  MG  P+VV
Sbjct: 334 LQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVV 393

Query: 48  TYNSLIGGYC 19
           T+ +LIGG+C
Sbjct: 394 TWTTLIGGFC 403



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/123 (30%), Positives = 63/123 (51%)
 Frame = -3

Query: 378 PNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLIQGLCNIGSRKSAAS 199
           P+V  YN+++   C    ++EA+ +F  M   +G  P +  +  LI G C   +      
Sbjct: 320 PDVFTYNSLIHIYCLQNKMNEAMRVFHLMVS-RGCLPDIVVFTSLIHGWCKDKNINKVMH 378

Query: 198 MLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEEPNVVTYNSLIGGYC 19
           +L EM + G +PDV T++ L+ GFC+ G  L A+ +   M   G+ PN+ T   ++ G C
Sbjct: 379 LLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLC 438

Query: 18  LVN 10
             N
Sbjct: 439 KGN 441



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/125 (29%), Positives = 64/125 (51%)
 Frame = -3

Query: 420 AVRCLRNMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLI 241
           AV     M + N + N+V+Y+ ++DG+C  G ++ A  LF+ +   KG+   V TY  +I
Sbjct: 446 AVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPG-KGLQINVYTYTIMI 504

Query: 240 QGLCNIGSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEE 61
           +GLC  GS   A  +L  M + G +PD  T+++ V G   +  +  +   ++ M   G  
Sbjct: 505 KGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFS 564

Query: 60  PNVVT 46
            +  T
Sbjct: 565 VDAAT 569



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 4/136 (2%)
 Frame = -3

Query: 411 CLRNMAEKNCEPNVVVYNAIMDGLCKDGLVS---EALNLFTEMSDDKGIHPTVSTYNCLI 241
           C  N  + +   N   +   M  LCK G V    EAL+LF  M+  K + P+V  +  L+
Sbjct: 25  CSTNTYDTDSHSNGTQFLISMRNLCKSGKVKNIDEALDLFQGMASMKPL-PSVKDFTLLL 83

Query: 240 QGLCNIGSRKSAASMLNEMMQK-GIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGE 64
             +  +    +A S++  +    GI  D  T +I+++  C+  LV    SV+  M  +G 
Sbjct: 84  GVIVRLKHYTTAISLVKHIFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGL 143

Query: 63  EPNVVTYNSLIGGYCL 16
           EP V+T  +LI G C+
Sbjct: 144 EPTVMTLTALINGLCV 159



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 36/134 (26%), Positives = 60/134 (44%)
 Frame = -3

Query: 420 AVRCLRNMAEKNCEPNVVVYNAIMDGLCKDGLVSEALNLFTEMSDDKGIHPTVSTYNCLI 241
           A+   + MA     P+V  +  ++  + +    + A++L   +    GI     T N +I
Sbjct: 60  ALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIEADTITLNIVI 119

Query: 240 QGLCNIGSRKSAASMLNEMMQKGIMPDVQTFSILVDGFCKEGLVLGARSVISFMVHMGEE 61
             LC +       S+L  M + G+ P V T + L++G C +G V  A  ++  M  M   
Sbjct: 120 NCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYP 179

Query: 60  PNVVTYNSLIGGYC 19
            +V TY  LI G C
Sbjct: 180 LDVYTYGVLINGLC 193