BLASTX nr result

ID: Glycyrrhiza23_contig00033303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033303
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003619016.1| Pentatricopeptide repeat-containing protein ...    84   1e-14
ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containi...    82   6e-14
ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containi...    75   7e-12
emb|CBI29931.3| unnamed protein product [Vitis vinifera]               75   7e-12
ref|XP_002319164.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11

>ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355494031|gb|AES75234.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 999

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 35/37 (94%), Positives = 36/37 (97%)
 Frame = +3

Query: 3    HNWIKHVSKISDRVIIVRDSYRFHHFKVGVCSCKDYW 113
            HNWIKHVSKI+DRVIIVRDSYRFHHFKVG CSCKDYW
Sbjct: 963  HNWIKHVSKITDRVIIVRDSYRFHHFKVGSCSCKDYW 999


>ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 1047

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 33/37 (89%), Positives = 36/37 (97%)
 Frame = +3

Query: 3    HNWIKHVSKISDRVIIVRDSYRFHHFKVGVCSCKDYW 113
            HNWIK+VSKISDRVI+VRDSYRFHHFK G+CSCKDYW
Sbjct: 1011 HNWIKYVSKISDRVIVVRDSYRFHHFKGGICSCKDYW 1047


>ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 989

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +3

Query: 3    HNWIKHVSKISDRVIIVRDSYRFHHFKVGVCSCKDYW 113
            HNWIK VSKIS+R I+VRD+YRFHHF+ GVCSCKDYW
Sbjct: 953  HNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 989


>emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = +3

Query: 3   HNWIKHVSKISDRVIIVRDSYRFHHFKVGVCSCKDYW 113
           HNWIK VSKIS+R I+VRD+YRFHHF+ GVCSCKDYW
Sbjct: 802 HNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 838


>ref|XP_002319164.1| predicted protein [Populus trichocarpa] gi|222857540|gb|EEE95087.1|
            predicted protein [Populus trichocarpa]
          Length = 989

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 29/37 (78%), Positives = 34/37 (91%)
 Frame = +3

Query: 3    HNWIKHVSKISDRVIIVRDSYRFHHFKVGVCSCKDYW 113
            H+WIK VSKIS+R IIVRD+YRFHHF+ G+CSCKDYW
Sbjct: 953  HSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989


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