BLASTX nr result

ID: Glycyrrhiza23_contig00033300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033300
         (582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551040.1| PREDICTED: nodulation protein H-like [Glycin...   292   3e-77
ref|XP_003525774.1| PREDICTED: nodulation protein H-like [Glycin...   287   1e-75
ref|XP_002310152.1| predicted protein [Populus trichocarpa] gi|2...   241   8e-62
ref|XP_002307259.1| predicted protein [Populus trichocarpa] gi|2...   237   1e-60
ref|XP_002281772.1| PREDICTED: uncharacterized protein LOC100254...   236   2e-60

>ref|XP_003551040.1| PREDICTED: nodulation protein H-like [Glycine max]
          Length = 350

 Score =  292 bits (747), Expect = 3e-77
 Identities = 150/171 (87%), Positives = 158/171 (92%), Gaps = 3/171 (1%)
 Frame = +2

Query: 77  NKDILVIKPQKKSPLLLRMSVLMFSMVCGVLICSVCLKQTSIHARTILLELQQIEKPSRN 256
           NKDILVIKPQKKSPLLLRMSVL+FSMVCGV ICSVCLKQ S HART+L+ELQ IEKPSR+
Sbjct: 13  NKDILVIKPQKKSPLLLRMSVLIFSMVCGVFICSVCLKQISTHARTMLMELQ-IEKPSRS 71

Query: 257 ---RLNLTEIHIPYLHYPKPVSFNRSECSGNPVKFFAILTNQRSGSGWFETLLNSHINVS 427
              RLNL    +P LHYPKPVSFNRSEC+GNPV+FFAIL+NQRSGSGWFETLLNSHINVS
Sbjct: 72  SSSRLNLKN-DVPLLHYPKPVSFNRSECAGNPVRFFAILSNQRSGSGWFETLLNSHINVS 130

Query: 428 SNGEIFSVTERRVNVSTIVQTLDKVYNLDWLSSASKNECSAAIGFKWMLNQ 580
           SNGEIFSV ERRVNVSTIVQTLDKVYNLDWLSSASKNECSAAIGFKWMLNQ
Sbjct: 131 SNGEIFSVRERRVNVSTIVQTLDKVYNLDWLSSASKNECSAAIGFKWMLNQ 181


>ref|XP_003525774.1| PREDICTED: nodulation protein H-like [Glycine max]
          Length = 361

 Score =  287 bits (734), Expect = 1e-75
 Identities = 149/185 (80%), Positives = 161/185 (87%), Gaps = 6/185 (3%)
 Frame = +2

Query: 44  FEELQRKFLNTNKDILVIKPQKKSPLLLRMSVLMFSMVCGVLICSVCLKQTSIHARTILL 223
           F ++ R   +   DILV+KPQKKSPLLLRMSVL+FSMVCGV ICSVCLKQ S HART+L+
Sbjct: 10  FNKVARTSASKVSDILVMKPQKKSPLLLRMSVLIFSMVCGVFICSVCLKQISTHARTMLM 69

Query: 224 ELQQIEKPSR------NRLNLTEIHIPYLHYPKPVSFNRSECSGNPVKFFAILTNQRSGS 385
           ELQ IEKPSR      NRLNLT   +P LHYP+PVSFNRSEC+GNPV+FFAIL+NQRSGS
Sbjct: 70  ELQ-IEKPSRSSISSINRLNLTH-DVPLLHYPEPVSFNRSECAGNPVRFFAILSNQRSGS 127

Query: 386 GWFETLLNSHINVSSNGEIFSVTERRVNVSTIVQTLDKVYNLDWLSSASKNECSAAIGFK 565
           GWFETLLNSHINVSSNGEIFSV ERRVNVSTIVQTLDKVYNLDWLSSASKNECSAAIG K
Sbjct: 128 GWFETLLNSHINVSSNGEIFSVRERRVNVSTIVQTLDKVYNLDWLSSASKNECSAAIGSK 187

Query: 566 WMLNQ 580
           WMLNQ
Sbjct: 188 WMLNQ 192


>ref|XP_002310152.1| predicted protein [Populus trichocarpa] gi|222853055|gb|EEE90602.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  241 bits (614), Expect = 8e-62
 Identities = 112/168 (66%), Positives = 143/168 (85%)
 Frame = +2

Query: 77  NKDILVIKPQKKSPLLLRMSVLMFSMVCGVLICSVCLKQTSIHARTILLELQQIEKPSRN 256
           NKD ++IKP KK+P+LLRM VL+F+MVCGV ICSVCLKQ S H++  + ++Q IE+PS +
Sbjct: 9   NKDTIIIKPAKKTPILLRMIVLVFAMVCGVYICSVCLKQISTHSKIKIQDIQVIERPSPD 68

Query: 257 RLNLTEIHIPYLHYPKPVSFNRSECSGNPVKFFAILTNQRSGSGWFETLLNSHINVSSNG 436
            ++   + I  +HYP P +F+R+EC+ NPV++FAIL+ QRSGSGWFETLLNSH+NVSSNG
Sbjct: 69  -VDHENLQISSVHYPNPETFSRAECAHNPVRYFAILSMQRSGSGWFETLLNSHVNVSSNG 127

Query: 437 EIFSVTERRVNVSTIVQTLDKVYNLDWLSSASKNECSAAIGFKWMLNQ 580
           EIFSV +RR+N+S+I QTLDKVYNLDW +SASKNECSAA+GFKWMLNQ
Sbjct: 128 EIFSVLDRRINISSITQTLDKVYNLDWFTSASKNECSAAVGFKWMLNQ 175


>ref|XP_002307259.1| predicted protein [Populus trichocarpa] gi|222856708|gb|EEE94255.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  237 bits (604), Expect = 1e-60
 Identities = 115/170 (67%), Positives = 141/170 (82%), Gaps = 2/170 (1%)
 Frame = +2

Query: 77  NKDILVIKPQKKSPLLLRMSVLMFSMVCGVLICSVCLKQTSIHARTILLELQQIEK--PS 250
           NKD +VIKP KK+P+LLRM VLMF+MVCGV ICSVCLKQTSIH++    ++Q +E+  P 
Sbjct: 9   NKDTIVIKPAKKTPILLRMIVLMFAMVCGVYICSVCLKQTSIHSKIKFQDIQVVERLSPD 68

Query: 251 RNRLNLTEIHIPYLHYPKPVSFNRSECSGNPVKFFAILTNQRSGSGWFETLLNSHINVSS 430
            +  NL    I  +HYP P +F+R+EC+ NPV++FAIL+ QRSGSGWFETLLNSH+NVSS
Sbjct: 69  DDHGNL---QISSVHYPNPETFSRAECAHNPVRYFAILSMQRSGSGWFETLLNSHVNVSS 125

Query: 431 NGEIFSVTERRVNVSTIVQTLDKVYNLDWLSSASKNECSAAIGFKWMLNQ 580
           NGEIFSV +RR N+S+I +TLDKVYNLDW +SASKNECSAA+GFKWMLNQ
Sbjct: 126 NGEIFSVLDRRRNISSITRTLDKVYNLDWFTSASKNECSAAVGFKWMLNQ 175


>ref|XP_002281772.1| PREDICTED: uncharacterized protein LOC100254393 isoform 1 [Vitis
           vinifera]
          Length = 340

 Score =  236 bits (602), Expect = 2e-60
 Identities = 113/168 (67%), Positives = 138/168 (82%)
 Frame = +2

Query: 77  NKDILVIKPQKKSPLLLRMSVLMFSMVCGVLICSVCLKQTSIHARTILLELQQIEKPSRN 256
           NKD L+IKP KKSP LLRM+VL+F+MVCGV IC +CLKQ SIH +        +E+PS +
Sbjct: 9   NKDTLIIKPPKKSPKLLRMTVLVFAMVCGVYICLICLKQISIHTKAKFENFWVVERPSDD 68

Query: 257 RLNLTEIHIPYLHYPKPVSFNRSECSGNPVKFFAILTNQRSGSGWFETLLNSHINVSSNG 436
               +   IP +HYPKP +F+R+EC+ NPV+FFAI++ QRSGSGWFETLLNSHINVSSNG
Sbjct: 69  H---SMKEIPNVHYPKPRTFSRAECANNPVRFFAIVSIQRSGSGWFETLLNSHINVSSNG 125

Query: 437 EIFSVTERRVNVSTIVQTLDKVYNLDWLSSASKNECSAAIGFKWMLNQ 580
           EIF+V +RR N+S+IV+TLDK+YNLDW SSASKNECSAA+GFKWMLNQ
Sbjct: 126 EIFNVYDRRKNISSIVKTLDKIYNLDWFSSASKNECSAAVGFKWMLNQ 173


Top