BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033275
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polyme...   147   9e-34
ref|XP_003595719.1| hypothetical protein MTR_2g059620 [Medicago ...   139   2e-31
ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arab...   114   8e-24
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ...   112   4e-23
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...   111   5e-23

>ref|XP_003517644.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine
           max]
          Length = 953

 Score =  147 bits (371), Expect = 9e-34
 Identities = 71/95 (74%), Positives = 84/95 (88%)
 Frame = -3

Query: 289 TSNKPHRTYLSKYLIALLSYGGVPNKFFMDVLKSNLEYADHVYFNKRFALRASVNHGEMD 110
           TSNKP R YLSK+LIALLS+GGVPN+FFMD+L+SN+E A+HVY NKR ALRAS+N GE D
Sbjct: 468 TSNKPKRGYLSKHLIALLSFGGVPNEFFMDLLRSNMEDANHVYSNKRSALRASINCGEKD 527

Query: 109 EYNAAGMILCGIPLDEPFLRYRLSKLATEEKKRLK 5
           EYNAA MILCGIPLDEPFL++ LS+ A EEKK+L+
Sbjct: 528 EYNAAEMILCGIPLDEPFLKHHLSRFAREEKKKLR 562


>ref|XP_003595719.1| hypothetical protein MTR_2g059620 [Medicago truncatula]
           gi|355484767|gb|AES65970.1| hypothetical protein
           MTR_2g059620 [Medicago truncatula]
          Length = 188

 Score =  139 bits (350), Expect = 2e-31
 Identities = 68/91 (74%), Positives = 76/91 (83%)
 Frame = -3

Query: 274 HRTYLSKYLIALLSYGGVPNKFFMDVLKSNLEYADHVYFNKRFALRASVNHGEMDEYNAA 95
           +R+YLSKYLIALLSYGGVPN+FF DVLK NLE  DH+Y  K  ALRASVNHGEMD +NAA
Sbjct: 59  NRSYLSKYLIALLSYGGVPNEFFTDVLKRNLEDVDHIYTKKCTALRASVNHGEMDGFNAA 118

Query: 94  GMILCGIPLDEPFLRYRLSKLATEEKKRLKR 2
            MILCGIPLDEPFLRY L+KL   EKK+L +
Sbjct: 119 AMILCGIPLDEPFLRYHLTKLVKVEKKKLSQ 149


>ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arabidopsis thaliana]
           gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
           Full=Probable RNA-dependent RNA polymerase 5;
           Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
           5 gi|330251850|gb|AEC06944.1| RNA-dependent RNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 977

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/95 (60%), Positives = 72/95 (75%)
 Frame = -3

Query: 289 TSNKPHRTYLSKYLIALLSYGGVPNKFFMDVLKSNLEYADHVYFNKRFALRASVNHGEMD 110
           TSN P RT LSK L+ALLSYGG+PN+FF+D+L + LE +  +++NKR AL A++N+GEMD
Sbjct: 495 TSNPPKRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNAALNYGEMD 554

Query: 109 EYNAAGMILCGIPLDEPFLRYRLSKLATEEKKRLK 5
           + NAA MIL GIPLDEP L+  LS L   EK  LK
Sbjct: 555 DQNAAQMILVGIPLDEPHLKNYLSILLKTEKNDLK 589


>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
           RNA polymerase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 981

 Score =  112 bits (279), Expect = 4e-23
 Identities = 55/95 (57%), Positives = 70/95 (73%)
 Frame = -3

Query: 289 TSNKPHRTYLSKYLIALLSYGGVPNKFFMDVLKSNLEYADHVYFNKRFALRASVNHGEMD 110
           TSN P RT LSK L+ALLSYGG+PN+FF+D+L + LE +  +++NK  AL  ++N+GEMD
Sbjct: 499 TSNPPRRTKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKHAALNVALNYGEMD 558

Query: 109 EYNAAGMILCGIPLDEPFLRYRLSKLATEEKKRLK 5
           + NAA MIL GIPLDEP L+  LS L   EK  LK
Sbjct: 559 DQNAAQMILVGIPLDEPHLKNHLSILLKTEKNDLK 593


>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
           sativus]
          Length = 1056

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/95 (58%), Positives = 72/95 (75%)
 Frame = -3

Query: 289 TSNKPHRTYLSKYLIALLSYGGVPNKFFMDVLKSNLEYADHVYFNKRFALRASVNHGEMD 110
           TSN P RT+LS+ LIALL+YGGVP ++FM++L   L+    V+ +KR ALR S+N+GEMD
Sbjct: 574 TSNPPKRTFLSRNLIALLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMD 633

Query: 109 EYNAAGMILCGIPLDEPFLRYRLSKLATEEKKRLK 5
           ++  A MIL GIPLDE +L+YRLS L  EEKK LK
Sbjct: 634 DFLVARMILAGIPLDESYLQYRLSVLLKEEKKSLK 668