BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033274
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602631.1| Pentatricopeptide repeat-containing protein ...   219   2e-55
ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containi...   216   2e-54
ref|XP_002517667.1| pentatricopeptide repeat-containing protein,...   201   4e-50
emb|CBI38165.3| unnamed protein product [Vitis vinifera]              182   3e-44
ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containi...   182   3e-44

>ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491679|gb|AES72882.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  219 bits (557), Expect = 2e-55
 Identities = 109/125 (87%), Positives = 114/125 (91%)
 Frame = -2

Query: 375 LVRKVVGDLSFLDSSPFAKLLDSCVRSKSVSDARRVHARIIKAQFSSEIFIQNRLVDAYG 196
           LVRKVVGDLSFLDSSPFAKLLD+CV+SKSV +AR VHARIIK QFSSEIFIQNRLVD YG
Sbjct: 6   LVRKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYG 65

Query: 195 KCGCLEDARKVFDHMPQRNTFSWNAVLSALTKCGALDEALNIFKGVPEPDQCSWNAMVSG 16
           KCG LEDARKVFDHM QRNTFSWNAVL ALTK GALDEALN+FK +PE DQCSWNAMVSG
Sbjct: 66  KCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSG 125

Query: 15  FAQHD 1
           FAQ D
Sbjct: 126 FAQRD 130



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/113 (30%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
 Frame = -2

Query: 339 DSSPFAKLLDSCVRSKSVSDARRVHARIIKA-QFSSEIFIQNRLVDAYGKCGCLEDARKV 163
           D    A +  +C    ++ +  ++HAR++K  ++ +++ + N LVD Y KC  + +AR V
Sbjct: 251 DEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLV 310

Query: 162 FDHMPQRNTFSWNAVLSALTKCGALDEALNIFKGVPEPDQCSWNAMVSGFAQH 4
           FD MP R+  S  +++S   K  ++  A  +F  + E +  SWNA+++G+ Q+
Sbjct: 311 FDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQN 363



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
 Frame = -2

Query: 327 FAKLLDSCVRSKSVSDARRVHARIIKAQF------SSEIFIQNRLVDAYGKCGCLEDARK 166
           F  LL++C     +   R+ H  I+K  F       S+IF+ N L+D Y KCG +ED R 
Sbjct: 388 FGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRL 447

Query: 165 VFDHMPQRNTFSWNAVLSALTKCGALDEALNIFK 64
           VF+ M +R+  SWNA++    + G   EAL IF+
Sbjct: 448 VFERMLERDNVSWNAMIVGYAQNGYGTEALEIFR 481



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
 Frame = -2

Query: 342 LDSSPFAKLLDSCVRSKSVSDARRVHARIIKAQFSSEIFIQNRLVDAYGKCGCLEDARKV 163
           L+   F   L +C     +S   ++H  I K+++S ++++ + LVD Y KC  +  A++ 
Sbjct: 149 LNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRA 208

Query: 162 FDHMPQRNTFSWNAVLSALTKCGALDEALNIFKGVP----EPDQCSWNAMVSGFA 10
           FD M  RN  SWN++++   + G   +AL +F  +     EPD+ +  ++ S  A
Sbjct: 209 FDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACA 263


>ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score =  216 bits (549), Expect = 2e-54
 Identities = 105/124 (84%), Positives = 112/124 (90%)
 Frame = -2

Query: 372 VRKVVGDLSFLDSSPFAKLLDSCVRSKSVSDARRVHARIIKAQFSSEIFIQNRLVDAYGK 193
           V+K+VG+L FLDSSPFAKLLDSCVRSKS  DARR+HARIIK QFSSEIFIQNRLVDAYGK
Sbjct: 7   VQKLVGELCFLDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGK 66

Query: 192 CGCLEDARKVFDHMPQRNTFSWNAVLSALTKCGALDEALNIFKGVPEPDQCSWNAMVSGF 13
           CG  EDARKVFD MPQRNTFS+NAVLS LTK G LDEA N+FK +PEPDQCSWNAMVSGF
Sbjct: 67  CGYFEDARKVFDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGF 126

Query: 12  AQHD 1
           AQHD
Sbjct: 127 AQHD 130



 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 33/113 (29%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
 Frame = -2

Query: 339 DSSPFAKLLDSCVRSKSVSDARRVHARIIKA-QFSSEIFIQNRLVDAYGKCGCLEDARKV 163
           D    A ++ +C    ++ +  ++HAR++K  ++ +++ + N LVD Y KC  + +AR V
Sbjct: 251 DEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLV 310

Query: 162 FDHMPQRNTFSWNAVLSALTKCGALDEALNIFKGVPEPDQCSWNAMVSGFAQH 4
           FD MP RN  S  +++    +  ++  A  +F  + E +  SWNA+++G+ Q+
Sbjct: 311 FDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQN 363



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 5/116 (4%)
 Frame = -2

Query: 342 LDSSPFAKLLDSCVRSKSVSDARRVHARIIKAQFSSEIFIQNRLVDAYGKCGCLEDARKV 163
           L+   F   L +C     ++   ++HA I K+++  ++++ + LVD Y KCG +  A++ 
Sbjct: 149 LNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRA 208

Query: 162 FDHMPQRNTFSWNAVLSALTKCGALDEALNIF-----KGVPEPDQCSWNAMVSGFA 10
           FD M  RN  SWN++++   + G   +AL +F      GV EPD+ +  ++VS  A
Sbjct: 209 FDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGV-EPDEITLASVVSACA 263



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
 Frame = -2

Query: 327 FAKLLDSCVRSKSVSDARRVHARIIKAQF------SSEIFIQNRLVDAYGKCGCLEDARK 166
           F  LL++C     +   R+ H +I+K  F       S+IF+ N L+D Y KCG +ED   
Sbjct: 388 FGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCL 447

Query: 165 VFDHMPQRNTFSWNAVLSALTKCGALDEALNIFK 64
           VF+ M +R+  SWNA++    + G    AL IF+
Sbjct: 448 VFERMVERDVVSWNAMIVGYAQNGYGTNALEIFR 481


>ref|XP_002517667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543299|gb|EEF44831.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 628

 Score =  201 bits (512), Expect = 4e-50
 Identities = 87/124 (70%), Positives = 108/124 (87%)
 Frame = -2

Query: 372 VRKVVGDLSFLDSSPFAKLLDSCVRSKSVSDARRVHARIIKAQFSSEIFIQNRLVDAYGK 193
           V+K+VGDLSFLDSSPFAKLLDSC++SKS+ D RR+HARIIK QF+ E+FIQNRL+DAYGK
Sbjct: 7   VKKIVGDLSFLDSSPFAKLLDSCLKSKSLRDTRRIHARIIKTQFAYEVFIQNRLIDAYGK 66

Query: 192 CGCLEDARKVFDHMPQRNTFSWNAVLSALTKCGALDEALNIFKGVPEPDQCSWNAMVSGF 13
           CGC +DARK+FD MP++N FSWNA++S L K G LDE   +F  +PEPDQCSWN++++GF
Sbjct: 67  CGCFDDARKIFDQMPEKNVFSWNAIVSTLVKSGFLDEGARLFVSMPEPDQCSWNSLIAGF 126

Query: 12  AQHD 1
           AQHD
Sbjct: 127 AQHD 130



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
 Frame = -2

Query: 342 LDSSPFAKLLDSCVRSKSVSDARRVHARIIKAQFSSEIFIQNRLVDAYGKCGCLEDARKV 163
           L+   F   L +C   K +    ++H  ++K+QF  ++++ + L+D Y KCG ++ A++V
Sbjct: 149 LNEYTFGSGLSACAGLKDLKIGTQIHGLMLKSQFLLDVYMGSALIDIYSKCGFVDCAQRV 208

Query: 162 FDHMPQRNTFSWNAVLSALTKCGALDEALNIFKGVP----EPDQCSWNAMVSGFA 10
           FD M +RN  SWN++++   + G   EAL IF  +     EPD+ +  ++VS  A
Sbjct: 209 FDGMMERNVVSWNSLITCYEQNGPSREALEIFMRMMESGFEPDEVTLASVVSACA 263



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 35/113 (30%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
 Frame = -2

Query: 339 DSSPFAKLLDSCVRSKSVSDARRVHARIIKA-QFSSEIFIQNRLVDAYGKCGCLEDARKV 163
           D    A ++ +C    +      +HA ++K  +   ++ + N LVD Y KCG + +AR V
Sbjct: 251 DEVTLASVVSACASLAAAKQGLEIHACVVKRDKLRDDLILSNALVDMYAKCGRINEARCV 310

Query: 162 FDHMPQRNTFSWNAVLSALTKCGALDEALNIFKGVPEPDQCSWNAMVSGFAQH 4
           FD MP RN  S  +++S   K  ++  A  +F  + E +  SWNA+++G+ Q+
Sbjct: 311 FDRMPIRNVVSETSMVSGYAKTASVKAARLLFTKMIERNVVSWNALIAGYTQN 363



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
 Frame = -2

Query: 327 FAKLLDSCVRSKSVSDARRVHARIIKAQF------SSEIFIQNRLVDAYGKCGCLEDARK 166
           F  LL++C     +   R+ HA ++K  F       S++F+ N L+D Y KCG +E+  +
Sbjct: 388 FGNLLNACANLADLQLGRQAHAHVLKHGFRFQYGEESDVFVGNALIDMYMKCGSVEEGCR 447

Query: 165 VFDHMPQRNTFSWNAVLSALTKCGALDEALNIFK 64
           +F++M +R+  SWNA++    + G   EAL +F+
Sbjct: 448 IFENMVERDYVSWNAMIVGYAQNGYGMEALGLFR 481


>emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  182 bits (461), Expect = 3e-44
 Identities = 84/121 (69%), Positives = 99/121 (81%)
 Frame = -2

Query: 363 VVGDLSFLDSSPFAKLLDSCVRSKSVSDARRVHARIIKAQFSSEIFIQNRLVDAYGKCGC 184
           +V DL   +SSPFAKLLDSC+RS+S    R VHARI+  QFS EIFIQNRL+D YGKC C
Sbjct: 6   LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65

Query: 183 LEDARKVFDHMPQRNTFSWNAVLSALTKCGALDEALNIFKGVPEPDQCSWNAMVSGFAQH 4
           L+DARK+FD MPQRNTF+WN+++S LTK G LDEA  +F  +PEPDQCSWN+MVSGFAQH
Sbjct: 66  LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQH 125

Query: 3   D 1
           D
Sbjct: 126 D 126



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/113 (29%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
 Frame = -2

Query: 339 DSSPFAKLLDSCVRSKSVSDARRVHARIIKA-QFSSEIFIQNRLVDAYGKCGCLEDARKV 163
           D    A ++ +C    ++ +  ++HAR++K  +F  ++ + N LVD Y KC  + +AR+V
Sbjct: 247 DEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRV 306

Query: 162 FDHMPQRNTFSWNAVLSALTKCGALDEALNIFKGVPEPDQCSWNAMVSGFAQH 4
           FD M  RN  S  +++S   +  ++  A  +F  + + +  SWNA+++G+ Q+
Sbjct: 307 FDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQN 359



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/115 (29%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
 Frame = -2

Query: 342 LDSSPFAKLLDSCVRSKSVSDARRVHARIIKAQFSSEIFIQNRLVDAYGKCGCLEDARKV 163
           L+   F   L +C     ++   +VHA + K+++S+++++ + L+D Y KCG +  A +V
Sbjct: 145 LNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEV 204

Query: 162 FDHMPQRNTFSWNAVLSALTKCGALDEALNIFKGVP----EPDQCSWNAMVSGFA 10
           F  M +RN  +WN++++   + G   EAL +F  +     EPD+ +  ++VS  A
Sbjct: 205 FSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACA 259



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/58 (44%), Positives = 38/58 (65%)
 Frame = -2

Query: 237 SEIFIQNRLVDAYGKCGCLEDARKVFDHMPQRNTFSWNAVLSALTKCGALDEALNIFK 64
           S+IF+ N L+D Y KCG +ED  +VF+ M +R+  SWNA++    + G   EAL IF+
Sbjct: 390 SDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFR 447


>ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  182 bits (461), Expect = 3e-44
 Identities = 84/121 (69%), Positives = 99/121 (81%)
 Frame = -2

Query: 363 VVGDLSFLDSSPFAKLLDSCVRSKSVSDARRVHARIIKAQFSSEIFIQNRLVDAYGKCGC 184
           +V DL   +SSPFAKLLDSC+RS+S    R VHARI+  QFS EIFIQNRL+D YGKC C
Sbjct: 6   LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65

Query: 183 LEDARKVFDHMPQRNTFSWNAVLSALTKCGALDEALNIFKGVPEPDQCSWNAMVSGFAQH 4
           L+DARK+FD MPQRNTF+WN+++S LTK G LDEA  +F  +PEPDQCSWN+MVSGFAQH
Sbjct: 66  LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQH 125

Query: 3   D 1
           D
Sbjct: 126 D 126



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/113 (29%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
 Frame = -2

Query: 339 DSSPFAKLLDSCVRSKSVSDARRVHARIIKA-QFSSEIFIQNRLVDAYGKCGCLEDARKV 163
           D    A ++ +C    ++ +  ++HAR++K  +F  ++ + N LVD Y KC  + +AR+V
Sbjct: 247 DEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRV 306

Query: 162 FDHMPQRNTFSWNAVLSALTKCGALDEALNIFKGVPEPDQCSWNAMVSGFAQH 4
           FD M  RN  S  +++S   +  ++  A  +F  + + +  SWNA+++G+ Q+
Sbjct: 307 FDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQN 359



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/115 (29%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
 Frame = -2

Query: 342 LDSSPFAKLLDSCVRSKSVSDARRVHARIIKAQFSSEIFIQNRLVDAYGKCGCLEDARKV 163
           L+   F   L +C     ++   +VHA + K+++S+++++ + L+D Y KCG +  A +V
Sbjct: 145 LNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEV 204

Query: 162 FDHMPQRNTFSWNAVLSALTKCGALDEALNIFKGVP----EPDQCSWNAMVSGFA 10
           F  M +RN  +WN++++   + G   EAL +F  +     EPD+ +  ++VS  A
Sbjct: 205 FSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACA 259



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
 Frame = -2

Query: 327 FAKLLDSCVRSKSVSDARRVHARIIKAQFS------SEIFIQNRLVDAYGKCGCLEDARK 166
           F  LL +C     +   R+ H  ++K  F       S+IF+ N L+D Y KCG +ED  +
Sbjct: 384 FGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSR 443

Query: 165 VFDHMPQRNTFSWNAVLSALTKCGALDEALNIFK 64
           VF+ M +R+  SWNA++    + G   EAL IF+
Sbjct: 444 VFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFR 477