BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033256
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608051.1| Pentatricopeptide repeat-containing protein ...   147   9e-34
ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containi...   144   6e-33
ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containi...    91   1e-16
emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]    91   1e-16
ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containi...    86   2e-15

>ref|XP_003608051.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355509106|gb|AES90248.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 763

 Score =  147 bits (371), Expect = 9e-34
 Identities = 74/107 (69%), Positives = 83/107 (77%)
 Frame = +3

Query: 60  MTLCLRFYQVRNSWKRREIFQLFTTLSQASEPHLADVISTNTSIARRAKTSDLEEARHMF 239
           MTL L+F  V  +WKR++  Q FTTL +AS+P+   VISTN SIA  AKT  L EARHMF
Sbjct: 1   MTLFLKFSPVSTTWKRKQKLQFFTTLLEASQPYPPHVISTNISIAHHAKTGKLVEARHMF 60

Query: 240 DEMPHRTVSSWNTMISGYSQCRRYTEALTLASFMHRSCVKLNEISFS 380
           DEMP RTVSSWNTMISGYSQ  +YTEALTL SFMH SCVK NE+SFS
Sbjct: 61  DEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMHSSCVKFNEVSFS 107


>ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 728

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/107 (67%), Positives = 82/107 (76%)
 Frame = +3

Query: 60  MTLCLRFYQVRNSWKRREIFQLFTTLSQASEPHLADVISTNTSIARRAKTSDLEEARHMF 239
           + LC      RN WKR E F+LFTT  Q +EPH+ +VISTN SIA+R K   LEEARH+F
Sbjct: 5   LRLCFVGTWKRNRWKRNERFRLFTTHLQTTEPHVGNVISTNISIAQRFKMGKLEEARHLF 64

Query: 240 DEMPHRTVSSWNTMISGYSQCRRYTEALTLASFMHRSCVKLNEISFS 380
           D+MP+RTVSSWNTMISGYS   RY EALTL SFMHRSCV LNE+SFS
Sbjct: 65  DQMPNRTVSSWNTMISGYSLLGRYPEALTLVSFMHRSCVALNEVSFS 111


>ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
           gi|302143682|emb|CBI22543.3| unnamed protein product
           [Vitis vinifera]
          Length = 728

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/100 (48%), Positives = 70/100 (70%), Gaps = 2/100 (2%)
 Frame = +3

Query: 87  VRNSWKRREI--FQLFTTLSQASEPHLADVISTNTSIARRAKTSDLEEARHMFDEMPHRT 260
           +  +WK + +  F+L+T    A + +L+++ISTN +I+  AK S L+ AR +FD+MP RT
Sbjct: 7   ISKAWKHQRLKEFKLYT----AHQSNLSEIISTNIAISNYAKQSKLDVARQLFDQMPQRT 62

Query: 261 VSSWNTMISGYSQCRRYTEALTLASFMHRSCVKLNEISFS 380
           V SWNTMIS YS+  R++EAL L   MHRS +KL+E +FS
Sbjct: 63  VVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTFS 102


>emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
          Length = 768

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/100 (48%), Positives = 70/100 (70%), Gaps = 2/100 (2%)
 Frame = +3

Query: 87  VRNSWKRREI--FQLFTTLSQASEPHLADVISTNTSIARRAKTSDLEEARHMFDEMPHRT 260
           +  +WK + +  F+L+T    A + +L+++ISTN +I+  AK S L+ AR +FD+MP RT
Sbjct: 47  ISKAWKHQRLKEFKLYT----AHQSNLSEIISTNIAISNYAKQSKLDVARQLFDQMPQRT 102

Query: 261 VSSWNTMISGYSQCRRYTEALTLASFMHRSCVKLNEISFS 380
           V SWNTMIS YS+  R++EAL L   MHRS +KL+E +FS
Sbjct: 103 VVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTFS 142


>ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Cucumis sativus]
          Length = 710

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 46/96 (47%), Positives = 64/96 (66%)
 Frame = +3

Query: 93  NSWKRREIFQLFTTLSQASEPHLADVISTNTSIARRAKTSDLEEARHMFDEMPHRTVSSW 272
           N WK     +LF+TL +      +++ISTN  I+R  +   L+ A+ +F+EMP R+V SW
Sbjct: 14  NRWKA--CLELFSTLCEGLHTENSNIISTNIYISRHVRDGHLDLAQTLFNEMPVRSVVSW 71

Query: 273 NTMISGYSQCRRYTEALTLASFMHRSCVKLNEISFS 380
           N MISGYS+  +Y+EAL LAS MH + VKLNE +FS
Sbjct: 72  NIMISGYSKFGKYSEALNLASEMHCNNVKLNETTFS 107