BLASTX nr result

ID: Glycyrrhiza23_contig00033235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033235
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containin...   147   1e-33
ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containin...   146   2e-33
ref|XP_003609285.1| Immunoglobulin G binding protein A [Medicago...   102   3e-20
ref|XP_003609343.1| Ein3-binding f-box protein [Medicago truncat...    79   5e-13
ref|XP_002524463.1| nucleic acid binding protein, putative [Rici...    64   1e-08

>ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
           [Glycine max]
          Length = 524

 Score =  147 bits (370), Expect = 1e-33
 Identities = 76/106 (71%), Positives = 86/106 (81%)
 Frame = -1

Query: 319 NKGSRCSFSHGPDDSFFTVKPVKNDNGSTNTLNLENKTSSGNKTGVTSTPGGTCFDQSLA 140
           NKG RCSF HGPDDS FTVKPVKNDNGST+ LNLENKTSSGN+ G+ STP     DQS+A
Sbjct: 98  NKGDRCSFLHGPDDSIFTVKPVKNDNGSTDALNLENKTSSGNRIGLVSTP----TDQSVA 153

Query: 139 APKALSDDKLRPKEDLQLPLPENVKQQGDCMELSAFDYKEATVSWS 2
           APK LSD KL+PKED QL +P++VKQQG  +ELSA +YKEA VS S
Sbjct: 154 APKNLSDLKLQPKEDHQLEIPKDVKQQGYYLELSASEYKEAAVSRS 199


>ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
           [Glycine max]
          Length = 526

 Score =  146 bits (369), Expect = 2e-33
 Identities = 75/106 (70%), Positives = 85/106 (80%)
 Frame = -1

Query: 319 NKGSRCSFSHGPDDSFFTVKPVKNDNGSTNTLNLENKTSSGNKTGVTSTPGGTCFDQSLA 140
           NKG RCSF HGPDDS F +KPVKN+NGST+ LNLENK  SGN+TGVTSTP     D+S+A
Sbjct: 98  NKGDRCSFLHGPDDSIFNIKPVKNENGSTDALNLENKAPSGNRTGVTSTP----TDRSVA 153

Query: 139 APKALSDDKLRPKEDLQLPLPENVKQQGDCMELSAFDYKEATVSWS 2
           APK LSD K +PKED QL LP+NVKQQGD +ELSA +YKEA VS S
Sbjct: 154 APKNLSDLKHQPKEDHQLELPKNVKQQGDYLELSASEYKEAAVSRS 199


>ref|XP_003609285.1| Immunoglobulin G binding protein A [Medicago truncatula]
           gi|355510340|gb|AES91482.1| Immunoglobulin G binding
           protein A [Medicago truncatula]
          Length = 594

 Score =  102 bits (255), Expect = 3e-20
 Identities = 56/90 (62%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
 Frame = -1

Query: 268 TVKPVKNDNGSTNTLNLENKTSSGNKTGV-TSTPGGTCFDQSLAAPKALSDDKLRPKEDL 92
           ++KP+KNDNGS N  NLEN T+SGNKT V +STP  T         KALS+ K +PKEDL
Sbjct: 195 SMKPLKNDNGSINKPNLENGTASGNKTSVASSTPRDTI------TRKALSNIKPQPKEDL 248

Query: 91  QLPLPENVKQQGDCMELSAFDYKEATVSWS 2
           QLPLPENVKQQGDC ++S+ DYKEA V+ S
Sbjct: 249 QLPLPENVKQQGDCFKISSLDYKEAVVTRS 278


>ref|XP_003609343.1| Ein3-binding f-box protein [Medicago truncatula]
           gi|355510398|gb|AES91540.1| Ein3-binding f-box protein
           [Medicago truncatula]
          Length = 1052

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 43/71 (60%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
 Frame = -1

Query: 229 TLNLENKTSSGNKTGV-TSTPGGTCFDQSLAAPKALSDDKLRPKEDLQLPLPENVKQQGD 53
           TL  EN T+SGNKT V +STP  T F+QS +APKALSD K +PKEDL  PLPENVKQQGD
Sbjct: 679 TLVNENGTASGNKTSVASSTPRDTHFNQSSSAPKALSDIKPQPKEDLPPPLPENVKQQGD 738

Query: 52  CMELSAFDYKE 20
            +++   +  E
Sbjct: 739 LLDMDDHELNE 749


>ref|XP_002524463.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223536251|gb|EEF37903.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 530

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/103 (34%), Positives = 51/103 (49%)
 Frame = -1

Query: 319 NKGSRCSFSHGPDDSFFTVKPVKNDNGSTNTLNLENKTSSGNKTGVTSTPGGTCFDQSLA 140
           NKG RC F HGP+ + FT K     +     + L++K S GN T   S P     + S  
Sbjct: 98  NKGDRCFFMHGPEANSFTGKSGSTSSAIKENIPLDSKISGGNDT--VSAPTEVNANPSET 155

Query: 139 APKALSDDKLRPKEDLQLPLPENVKQQGDCMELSAFDYKEATV 11
           A KA+ D KL+P ED Q P PE    +    +++    +EA +
Sbjct: 156 AAKAVKDLKLQPYEDFQFPAPEKTVMRSPSPQIAVSQSEEAVI 198


Top