BLASTX nr result

ID: Glycyrrhiza23_contig00033229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033229
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-li...   160   1e-37
ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-li...   154   7e-36
ref|XP_003626059.1| Condensin-2 complex subunit D3 [Medicago tru...   149   2e-34
ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|22...   119   3e-25
ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24

>ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1324

 Score =  160 bits (404), Expect = 1e-37
 Identities = 89/138 (64%), Positives = 100/138 (72%), Gaps = 3/138 (2%)
 Frame = -2

Query: 408  NSPLIGSLMECLRVLLKDYKNEIDDILVADKQLQKELIYDMQKFXXXXXXXXXXXXXXSR 229
            NSPLIGSLMECLR++LKDYKNEIDDILVADKQLQKELIYD+QK+              ++
Sbjct: 1160 NSPLIGSLMECLRIILKDYKNEIDDILVADKQLQKELIYDIQKYEAAKAKATVAEAVGTK 1219

Query: 228  PNQSS---PDVSKNLTKTQRKTLGQSKYSNKFPSGSKVXXXXXXXXXXXXARSVLREINK 58
            P   S    DVSKNLTKTQ +T+GQS  SN+ PS S+V            ARSVLREINK
Sbjct: 1220 PKSGSNQLADVSKNLTKTQEQTVGQS--SNELPSDSRVASAIADTAAAATARSVLREINK 1277

Query: 57   GTGTPPLSSLNVPKVKSC 4
            GTGTPPLSSL+VPKVKSC
Sbjct: 1278 GTGTPPLSSLSVPKVKSC 1295


>ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1334

 Score =  154 bits (389), Expect = 7e-36
 Identities = 86/138 (62%), Positives = 99/138 (71%), Gaps = 3/138 (2%)
 Frame = -2

Query: 408  NSPLIGSLMECLRVLLKDYKNEIDDILVADKQLQKELIYDMQKFXXXXXXXXXXXXXXSR 229
            NSPLIGSLMECLR++LKDYKNEIDDILVADKQLQKELIYD++K+              ++
Sbjct: 1170 NSPLIGSLMECLRIILKDYKNEIDDILVADKQLQKELIYDIKKYEAAKAKATVAEAVGTK 1229

Query: 228  P---NQSSPDVSKNLTKTQRKTLGQSKYSNKFPSGSKVXXXXXXXXXXXXARSVLREINK 58
            P   +  SPD SKNLTKTQ +T+GQS  SN+ PS S+V            ARSVLREINK
Sbjct: 1230 PKSVSNQSPDASKNLTKTQGQTVGQS--SNELPSDSRVASAMANAAAAATARSVLREINK 1287

Query: 57   GTGTPPLSSLNVPKVKSC 4
            GT TP LSSL+VPKVKSC
Sbjct: 1288 GTATPSLSSLSVPKVKSC 1305


>ref|XP_003626059.1| Condensin-2 complex subunit D3 [Medicago truncatula]
            gi|355501074|gb|AES82277.1| Condensin-2 complex subunit
            D3 [Medicago truncatula]
          Length = 854

 Score =  149 bits (376), Expect = 2e-34
 Identities = 84/137 (61%), Positives = 94/137 (68%), Gaps = 3/137 (2%)
 Frame = -2

Query: 408  NSPLIGSLMECLRVLLKDYKNEIDDILVADKQLQKELIYDMQKFXXXXXXXXXXXXXXSR 229
            NSPLIGSLMECLRVLLKDYKNEIDDILVADKQLQKELIYDMQK+              ++
Sbjct: 694  NSPLIGSLMECLRVLLKDYKNEIDDILVADKQLQKELIYDMQKYEAAKAKATVAEAIAAK 753

Query: 228  PN---QSSPDVSKNLTKTQRKTLGQSKYSNKFPSGSKVXXXXXXXXXXXXARSVLREINK 58
            P      SPDVSKNLTK   +T  Q+  S+  PSGS++            ARSVL+EINK
Sbjct: 754  PKSGANQSPDVSKNLTKEHGQTQVQNVDSDMLPSGSRIASAMADAAAASTARSVLKEINK 813

Query: 57   GTGTPPLSSLNVPKVKS 7
            GT TP LSSLN+PKVKS
Sbjct: 814  GTATPQLSSLNIPKVKS 830


>ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|223544021|gb|EEF45547.1|
            condensin, putative [Ricinus communis]
          Length = 1313

 Score =  119 bits (297), Expect = 3e-25
 Identities = 69/137 (50%), Positives = 88/137 (64%), Gaps = 3/137 (2%)
 Frame = -2

Query: 408  NSPLIGSLMECLRVLLKDYKNEIDDILVADKQLQKELIYDMQKFXXXXXXXXXXXXXXSR 229
            NS L+GSLMECLR+LLKDYKNEIDDILVADKQLQKELIYDMQK+              + 
Sbjct: 1149 NSLLMGSLMECLRILLKDYKNEIDDILVADKQLQKELIYDMQKYESNEAKITAAQAVATM 1208

Query: 228  PNQS---SPDVSKNLTKTQRKTLGQSKYSNKFPSGSKVXXXXXXXXXXXXARSVLREINK 58
               S   SP V K   +T +   GQ+K+ +   + ++V            ARSVL+E+NK
Sbjct: 1209 QKPSSFLSPGVPKTANRTAQ---GQNKFPDNLHNDARVASAMADATAAARARSVLKEVNK 1265

Query: 57   GTGTPPLSSLNVPKVKS 7
            G+ TPPLS+++VPK+KS
Sbjct: 1266 GSLTPPLSAISVPKLKS 1282


>ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|222864559|gb|EEF01690.1|
            predicted protein [Populus trichocarpa]
          Length = 1272

 Score =  117 bits (293), Expect = 1e-24
 Identities = 68/133 (51%), Positives = 81/133 (60%)
 Frame = -2

Query: 408  NSPLIGSLMECLRVLLKDYKNEIDDILVADKQLQKELIYDMQKFXXXXXXXXXXXXXXSR 229
            NSPL GSLMECLR++LKDYKNEID+ILVADKQLQKELIYDMQK+              S 
Sbjct: 1109 NSPLTGSLMECLRIILKDYKNEIDEILVADKQLQKELIYDMQKYETSKAKSAAAVVVASM 1168

Query: 228  PNQSSPDVSKNLTKTQRKTLGQSKYSNKFPSGSKVXXXXXXXXXXXXARSVLREINKGTG 49
             N SS  +S   +KT   T  Q   +    S S+V             RSVLRE+N+G  
Sbjct: 1169 QNHSS-FLSPGASKTAGGTKAQDNLNENPQSDSRVASAMANAVAEARVRSVLREVNRGIA 1227

Query: 48   TPPLSSLNVPKVK 10
            TPPLSS++ PK+K
Sbjct: 1228 TPPLSSISRPKLK 1240


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