BLASTX nr result

ID: Glycyrrhiza23_contig00033188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033188
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    92   3e-17
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355...    87   1e-15
ref|XP_003618992.1| hypothetical protein MTR_6g031160 [Medicago ...    84   2e-14
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ...    73   2e-11
ref|XP_003613921.1| hypothetical protein MTR_5g042640 [Medicago ...    69   3e-10

>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 37/102 (36%), Positives = 59/102 (57%)
 Frame = +1

Query: 7    CTNCLPSRVRLREKGVDCTEDCMVCGSANETMWHALVSCPQSQRCWQA*GLWRGISESVH 186
            C N LP+RVRL+++GV+CT+ C +C + +E   H    C +S++CWQ  GLW  + +   
Sbjct: 1437 CRNALPTRVRLQDRGVNCTKTCALCENEDEDSMHLFFYCTKSRQCWQQLGLWSKVQQKAQ 1496

Query: 187  DGISLKELFFKMGATLSSPQLTQFAMTLWRLWVSRNNCLWNN 312
              +S     F++   L S Q   +A  +W +W  RN+C+W N
Sbjct: 1497 LNLSFGVTMFEILQELDSSQRVIWACVMWSIWKQRNDCIWRN 1538


>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
           Cytochrome P450 [Medicago truncatula]
          Length = 687

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/107 (37%), Positives = 54/107 (50%)
 Frame = +1

Query: 7   CTNCLPSRVRLREKGVDCTEDCMVCGSANETMWHALVSCPQSQRCWQA*GLWRGISESVH 186
           C NCLP+R+RL+ KGV C + C VC    E   H    C +S   WQ  GLW  +     
Sbjct: 386 CRNCLPTRIRLQSKGVQCIDRCAVCDDFGEDSNHLFFMCSKSMLYWQRIGLWSPLMAVFD 445

Query: 187 DGISLKELFFKMGATLSSPQLTQFAMTLWRLWVSRNNCLWNNVKDNS 327
             +S     F +   L   Q   F++TLW +W  RNN +WNN+ D +
Sbjct: 446 INVSFPTNVFAILQHLDQQQKQIFSVTLWSIWKHRNNKVWNNITDTA 492


>ref|XP_003618992.1| hypothetical protein MTR_6g031160 [Medicago truncatula]
           gi|355494007|gb|AES75210.1| hypothetical protein
           MTR_6g031160 [Medicago truncatula]
          Length = 183

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/107 (35%), Positives = 57/107 (53%)
 Frame = +1

Query: 13  NCLPSRVRLREKGVDCTEDCMVCGSANETMWHALVSCPQSQRCWQA*GLWRGISESVHDG 192
           +CLP   RL  KGV+CT +C++C S  +  WH  + C  S  CW+   +W  + E +   
Sbjct: 7   DCLPIGQRLNCKGVECTSNCVICQSYTKYNWHLFLVCADSITCWRKVNIWSLLEELMDGA 66

Query: 193 ISLKELFFKMGATLSSPQLTQFAMTLWRLWVSRNNCLWNNVKDNSDR 333
            S  ++F +M   L   QL  F+MT W +W  RN  LW N  ++ D+
Sbjct: 67  ESFGDVFTRMWQRLLVEQLMSFSMTSWSIWKKRNLKLWKNKIESLDQ 113


>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 393

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 32/108 (29%), Positives = 53/108 (49%)
 Frame = +1

Query: 4   LCTNCLPSRVRLREKGVDCTEDCMVCGSANETMWHALVSCPQSQRCWQA*GLWRGISESV 183
           +C  C P+RVRL  +GV+C   C+ C   +E  +H    C  +   W    +W  I+ S+
Sbjct: 75  VCRECFPTRVRLISRGVNCPSACVKCEDPHEDCYHIFFHCRTAIDVWNTANVWHLIAPSL 134

Query: 184 HDGISLKELFFKMGATLSSPQLTQFAMTLWRLWVSRNNCLWNNVKDNS 327
               +  ++ F +   LS+ Q+      +W +W SRN  LW  V ++S
Sbjct: 135 SQFDNAPDIIFNLLQKLSASQMESIVTIMWSIWKSRNLKLWQQVSESS 182


>ref|XP_003613921.1| hypothetical protein MTR_5g042640 [Medicago truncatula]
           gi|355515256|gb|AES96879.1| hypothetical protein
           MTR_5g042640 [Medicago truncatula]
          Length = 270

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 31/108 (28%), Positives = 52/108 (48%)
 Frame = +1

Query: 4   LCTNCLPSRVRLREKGVDCTEDCMVCGSANETMWHALVSCPQSQRCWQA*GLWRGISESV 183
           +C  CLP+ VRL +KGV C  +   C S +E + H    CP + + W   GLW  +  ++
Sbjct: 23  MCRGCLPTHVRLLDKGVTCPTNWASCASNHEDLMHVFFDCPFAIQVWHRTGLWGSVQHAL 82

Query: 184 HDGISLKELFFKMGATLSSPQLTQFAMTLWRLWVSRNNCLWNNVKDNS 327
               S  +  F +   LS     + +  +W +W   N  +W++V + S
Sbjct: 83  SITASATKAIFFLLENLSVELTQRLSSVIWSIWKHHNLRVWDDVTETS 130


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