BLASTX nr result

ID: Glycyrrhiza23_contig00033161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033161
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624935.1| DNA repair protein RAD5 [Medicago truncatula...   249   2e-64
ref|XP_003520482.1| PREDICTED: putative SWI/SNF-related matrix-a...   216   2e-54
ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a...   199   3e-49
ref|XP_002517285.1| helicase, putative [Ricinus communis] gi|223...   195   4e-48
ref|XP_002308876.1| chromatin remodeling complex subunit [Populu...   182   3e-44

>ref|XP_003624935.1| DNA repair protein RAD5 [Medicago truncatula]
            gi|124360542|gb|ABN08552.1| SNF2-related; Zinc finger,
            RING-type; ATP-requiring DNA helicase RecQ [Medicago
            truncatula] gi|355499950|gb|AES81153.1| DNA repair
            protein RAD5 [Medicago truncatula]
          Length = 844

 Score =  249 bits (635), Expect = 2e-64
 Identities = 127/154 (82%), Positives = 137/154 (88%), Gaps = 4/154 (2%)
 Frame = +3

Query: 3    DIVITCCAHIFCRGCILKALRRSNSLCPLCRRSLSESDLFSAPPESFKTD----TTEPCK 170
            DIVITCCAHIFCR CILK L+RSNS CPLCRRSLSE++LFSAPPESFKTD    TTE C 
Sbjct: 604  DIVITCCAHIFCRECILKTLQRSNSSCPLCRRSLSETELFSAPPESFKTDDTDVTTELCT 663

Query: 171  SERRLSTKVSTLIKLLTESRDQNPTIKSVVFSQFRKMLLLLEEPLKAAGIKTLRLDGTMN 350
            +E R STKVSTLIKLLTESRDQNP  KSVVFSQFRKMLLLLEEPLKAAG KTLRLDGTMN
Sbjct: 664  AEVRSSTKVSTLIKLLTESRDQNPATKSVVFSQFRKMLLLLEEPLKAAGFKTLRLDGTMN 723

Query: 351  AKHRARIVEQFQVSEIDRPMVLLASLRASSAGIN 452
            AK RA+++EQFQ+SE+D PM+LLASLRASS GIN
Sbjct: 724  AKQRAQVIEQFQLSEVDEPMILLASLRASSTGIN 757


>ref|XP_003520482.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 1-like
            [Glycine max]
          Length = 823

 Score =  216 bits (549), Expect = 2e-54
 Identities = 112/151 (74%), Positives = 123/151 (81%), Gaps = 1/151 (0%)
 Frame = +3

Query: 3    DIVITCCAHIFCRGCILKALRRSNSLCPLCRRSLSESDLFSAPPESFKTDTTEPCKSERR 182
            +IVIT CAHIFCR CIL+AL+  N  CPLCRR L ESDLFSAPPES K D+   C S + 
Sbjct: 590  EIVITRCAHIFCRICILRALQNKNPCCPLCRRRLKESDLFSAPPESSKVDSAGECSSSQT 649

Query: 183  -LSTKVSTLIKLLTESRDQNPTIKSVVFSQFRKMLLLLEEPLKAAGIKTLRLDGTMNAKH 359
             L +KVSTLIKLLTESRDQ+P  KSVVFSQFRK+LLL+EEPL AAG KTLRLDGTMNAKH
Sbjct: 650  VLPSKVSTLIKLLTESRDQHPAAKSVVFSQFRKLLLLMEEPLNAAGFKTLRLDGTMNAKH 709

Query: 360  RARIVEQFQVSEIDRPMVLLASLRASSAGIN 452
            RA ++EQFQ   ID P VLLASLRASSAGIN
Sbjct: 710  RANVIEQFQSQGIDGPTVLLASLRASSAGIN 740


>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 1-like
            [Vitis vinifera]
          Length = 874

 Score =  199 bits (505), Expect = 3e-49
 Identities = 103/150 (68%), Positives = 121/150 (80%)
 Frame = +3

Query: 3    DIVITCCAHIFCRGCILKALRRSNSLCPLCRRSLSESDLFSAPPESFKTDTTEPCKSERR 182
            +IVITCCAHIFCR CILK L+R+   CPLCR  LS+SDLFSAPPES +TD +E   SE  
Sbjct: 639  NIVITCCAHIFCRVCILKTLKRTKPCCPLCRHPLSQSDLFSAPPESTETDNSEIPSSECT 698

Query: 183  LSTKVSTLIKLLTESRDQNPTIKSVVFSQFRKMLLLLEEPLKAAGIKTLRLDGTMNAKHR 362
             S+KV TL+K L+ SRDQNP+ KSVVFSQFRKMLLLLE+PLKAAG KTLRLDG+MNAK R
Sbjct: 699  -SSKVLTLLKFLSASRDQNPSTKSVVFSQFRKMLLLLEQPLKAAGFKTLRLDGSMNAKRR 757

Query: 363  ARIVEQFQVSEIDRPMVLLASLRASSAGIN 452
            A+++E+F     + P VLLASL+AS AGIN
Sbjct: 758  AQVIEEFGAPGPNGPTVLLASLKASGAGIN 787


>ref|XP_002517285.1| helicase, putative [Ricinus communis] gi|223543548|gb|EEF45078.1|
           helicase, putative [Ricinus communis]
          Length = 363

 Score =  195 bits (495), Expect = 4e-48
 Identities = 98/150 (65%), Positives = 118/150 (78%)
 Frame = +3

Query: 3   DIVITCCAHIFCRGCILKALRRSNSLCPLCRRSLSESDLFSAPPESFKTDTTEPCKSERR 182
           D VIT CAH+FCR CILK L+R    CPLCRRSL+ SDLFSAPPES  TD TE   S+R 
Sbjct: 128 DTVITRCAHVFCRPCILKTLQRMKPCCPLCRRSLTMSDLFSAPPESSHTDNTEISSSKRN 187

Query: 183 LSTKVSTLIKLLTESRDQNPTIKSVVFSQFRKMLLLLEEPLKAAGIKTLRLDGTMNAKHR 362
            S+KVS L+ LL  +RD+NPT KSV+FSQF+KML+LLEEPLKAAG K LRLDGTMNAK +
Sbjct: 188 TSSKVSALLNLLMAARDKNPTAKSVIFSQFQKMLVLLEEPLKAAGFKILRLDGTMNAKKK 247

Query: 363 ARIVEQFQVSEIDRPMVLLASLRASSAGIN 452
           A+++++F +   + P VLLASL+AS AGIN
Sbjct: 248 AQVIKEFGIPGPNGPTVLLASLKASCAGIN 277


>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222854852|gb|EEE92399.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 799

 Score =  182 bits (461), Expect = 3e-44
 Identities = 98/150 (65%), Positives = 112/150 (74%)
 Frame = +3

Query: 3    DIVITCCAHIFCRGCILKALRRSNSLCPLCRRSLSESDLFSAPPESFKTDTTEPCKSERR 182
            + VIT CAHIFCR CILK L+R+   CPLCRR LS SDLFSAPPES  +D      S   
Sbjct: 564  ETVITRCAHIFCRPCILKTLQRAKQCCPLCRRPLSVSDLFSAPPESSGSDNANT-SSRTT 622

Query: 183  LSTKVSTLIKLLTESRDQNPTIKSVVFSQFRKMLLLLEEPLKAAGIKTLRLDGTMNAKHR 362
             S+KVS LIKLL  SR +NP  KSVVFSQF+KML+LLEEPLK AG K LRLDG+MNAK R
Sbjct: 623  TSSKVSALIKLLIASRVENPARKSVVFSQFQKMLVLLEEPLKEAGFKILRLDGSMNAKKR 682

Query: 363  ARIVEQFQVSEIDRPMVLLASLRASSAGIN 452
            A++++QF V   D P VLLASL+AS AGIN
Sbjct: 683  AQVIKQFGVPGPDGPTVLLASLKASGAGIN 712


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