BLASTX nr result

ID: Glycyrrhiza23_contig00033136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033136
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ00278.1| hypothetical protein [Lotus japonicus]                 91   1e-17
emb|CAJ00277.1| hypothetical protein [Lotus japonicus]                 91   1e-17
emb|CAJ00274.1| hypothetical protein [Lotus japonicus]                 91   1e-17
emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]    82   6e-14
gb|ABD78322.1| polyprotein [Primula vulgaris]                          80   7e-14

>emb|CAJ00278.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score = 91.3 bits (225), Expect(2) = 1e-17
 Identities = 46/83 (55%), Positives = 53/83 (63%)
 Frame = -2

Query: 301  HDSMTKAQLNMKSYANGKRQDRVLKVGDWVMLKL*PYRQVSVQGHQSPKLAPRYFGPYQV 122
            H ++ +AQ  MK  A+  R DR   VGDWV+LKL PYRQ S Q   S KL+PR+FGPYQV
Sbjct: 1335 HANLMRAQARMKIQADKHRTDREFSVGDWVLLKLQPYRQSSTQHRASEKLSPRFFGPYQV 1394

Query: 121  TKVVGTVPYELALPPRGKNSPCF 53
               VG V Y LALPP  K  P F
Sbjct: 1395 LHRVGKVAYTLALPPESKIHPTF 1417



 Score = 23.1 bits (48), Expect(2) = 1e-17
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 75   EARIHPVFHIS 43
            E++IHP FH+S
Sbjct: 1410 ESKIHPTFHVS 1420


>emb|CAJ00277.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score = 91.3 bits (225), Expect(2) = 1e-17
 Identities = 46/83 (55%), Positives = 53/83 (63%)
 Frame = -2

Query: 301  HDSMTKAQLNMKSYANGKRQDRVLKVGDWVMLKL*PYRQVSVQGHQSPKLAPRYFGPYQV 122
            H ++ +AQ  MK  A+  R DR   VGDWV+LKL PYRQ S Q   S KL+PR+FGPYQV
Sbjct: 1335 HANLMRAQARMKIQADKHRTDREFSVGDWVLLKLQPYRQSSTQHRASEKLSPRFFGPYQV 1394

Query: 121  TKVVGTVPYELALPPRGKNSPCF 53
               VG V Y LALPP  K  P F
Sbjct: 1395 LHRVGKVAYTLALPPESKIHPTF 1417



 Score = 23.1 bits (48), Expect(2) = 1e-17
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 75   EARIHPVFHIS 43
            E++IHP FH+S
Sbjct: 1410 ESKIHPTFHVS 1420


>emb|CAJ00274.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score = 91.3 bits (225), Expect(2) = 1e-17
 Identities = 46/83 (55%), Positives = 53/83 (63%)
 Frame = -2

Query: 301  HDSMTKAQLNMKSYANGKRQDRVLKVGDWVMLKL*PYRQVSVQGHQSPKLAPRYFGPYQV 122
            H ++ +AQ  MK  A+  R DR   VGDWV+LKL PYRQ S Q   S KL+PR+FGPYQV
Sbjct: 1335 HANLMRAQARMKIQADKHRTDREFSVGDWVLLKLQPYRQSSTQHRASEKLSPRFFGPYQV 1394

Query: 121  TKVVGTVPYELALPPRGKNSPCF 53
               VG V Y LALPP  K  P F
Sbjct: 1395 LHRVGKVAYTLALPPESKIHPTF 1417



 Score = 23.1 bits (48), Expect(2) = 1e-17
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -3

Query: 75   EARIHPVFHIS 43
            E++IHP FH+S
Sbjct: 1410 ESKIHPTFHVS 1420


>emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
          Length = 1360

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 48/97 (49%), Positives = 59/97 (60%)
 Frame = -2

Query: 295  SMTKAQLNMKSYANGKRQDRVLKVGDWVMLKL*PYRQVSVQGHQSPKLAPRYFGPYQVTK 116
            ++ +AQ  MK  A+  R+D    VGD+V LKL PYRQ SV    S KLAPR+FGPYQV +
Sbjct: 1247 NLLQAQNRMKCQADQHRRDASFAVGDYVYLKLQPYRQTSVAFRGSMKLAPRFFGPYQVIE 1306

Query: 115  VVGTVPYELALPPRGKNSPCFSHFLKLFHGSLLPSRL 5
             VG+V Y+LALPP        S    +FH SLL   L
Sbjct: 1307 KVGSVAYKLALPPG-------SQIHNVFHVSLLRRHL 1336


>gb|ABD78322.1| polyprotein [Primula vulgaris]
          Length = 1359

 Score = 79.7 bits (195), Expect(2) = 7e-14
 Identities = 41/78 (52%), Positives = 52/78 (66%)
 Frame = -2

Query: 286  KAQLNMKSYANGKRQDRVLKVGDWVMLKL*PYRQVSVQGHQSPKLAPRYFGPYQVTKVVG 107
            +AQ  MK  A+  R D+  KVGD+V LKL PYRQ SV   ++ KLAPR+FGPY++T+ VG
Sbjct: 1231 EAQNRMKQNADLNRVDKCYKVGDYVYLKLQPYRQQSVIRRRNQKLAPRFFGPYKITEKVG 1290

Query: 106  TVPYELALPPRGKNSPCF 53
             V Y+L LPP     P F
Sbjct: 1291 AVAYKLELPPTSGIHPVF 1308



 Score = 21.9 bits (45), Expect(2) = 7e-14
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -3

Query: 66   IHPVFHIS 43
            IHPVFHIS
Sbjct: 1304 IHPVFHIS 1311


Top