BLASTX nr result

ID: Glycyrrhiza23_contig00033128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033128
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551078.1| PREDICTED: putative SWI/SNF-related matrix-a...   177   1e-42
ref|XP_003540216.1| PREDICTED: putative SWI/SNF-related matrix-a...   169   3e-40
ref|XP_002328182.1| chromatin remodeling complex subunit [Populu...   139   3e-31
ref|XP_003632276.1| PREDICTED: putative SWI/SNF-related matrix-a...   135   3e-30
emb|CBI17093.3| unnamed protein product [Vitis vinifera]              135   3e-30

>ref|XP_003551078.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like [Glycine max]
          Length = 1009

 Score =  177 bits (448), Expect = 1e-42
 Identities = 81/97 (83%), Positives = 91/97 (93%)
 Frame = -3

Query: 301 FSFQVTLLPAKSERPSQNGHENENEDSVSEIDLDNIVGVGSSSDLEEMDPPGNLLCELRP 122
           +S QVTL  +KSE PSQNGHE++NEDS+SEID++NIVGVGSSS+LEEMDPPGNL+CELRP
Sbjct: 270 YSLQVTLPCSKSEHPSQNGHESDNEDSISEIDVENIVGVGSSSELEEMDPPGNLMCELRP 329

Query: 121 YQKQALYWMIQMEKGRSMDETTTTLHPCWEAYRLADK 11
           YQKQALYWMIQMEKG+SMDET TTLHPCWEAY LADK
Sbjct: 330 YQKQALYWMIQMEKGQSMDETATTLHPCWEAYHLADK 366


>ref|XP_003540216.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like [Glycine max]
          Length = 1008

 Score =  169 bits (427), Expect = 3e-40
 Identities = 78/93 (83%), Positives = 85/93 (91%)
 Frame = -3

Query: 289 VTLLPAKSERPSQNGHENENEDSVSEIDLDNIVGVGSSSDLEEMDPPGNLLCELRPYQKQ 110
           V L   KSE PSQNG EN+NEDS+SEID++NIVGVGSSS+LEEMDPPGNL+CELRPYQKQ
Sbjct: 273 VPLPRTKSEHPSQNGQENDNEDSISEIDVENIVGVGSSSELEEMDPPGNLMCELRPYQKQ 332

Query: 109 ALYWMIQMEKGRSMDETTTTLHPCWEAYRLADK 11
           ALYWMIQMEKG+SMDET TTLHPCWEAY LADK
Sbjct: 333 ALYWMIQMEKGQSMDETATTLHPCWEAYHLADK 365


>ref|XP_002328182.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222837697|gb|EEE76062.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 896

 Score =  139 bits (349), Expect = 3e-31
 Identities = 67/99 (67%), Positives = 78/99 (78%), Gaps = 1/99 (1%)
 Frame = -3

Query: 304 GFSFQVTLLPA-KSERPSQNGHENENEDSVSEIDLDNIVGVGSSSDLEEMDPPGNLLCEL 128
           G    V+LL A KS+  S NG+E ENE+S+S+ DL+NIVG G SS+LEEMDPP  L CEL
Sbjct: 188 GSGLPVSLLNANKSKNQSGNGNEIENEESISDADLENIVGGGDSSELEEMDPPSTLQCEL 247

Query: 127 RPYQKQALYWMIQMEKGRSMDETTTTLHPCWEAYRLADK 11
           RPYQKQAL+WMI +EKG+ MDE  TTLHPCWEAY LADK
Sbjct: 248 RPYQKQALHWMIHLEKGKCMDEAATTLHPCWEAYHLADK 286


>ref|XP_003632276.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 2-like [Vitis vinifera]
          Length = 1029

 Score =  135 bits (340), Expect = 3e-30
 Identities = 61/87 (70%), Positives = 72/87 (82%)
 Frame = -3

Query: 271 KSERPSQNGHENENEDSVSEIDLDNIVGVGSSSDLEEMDPPGNLLCELRPYQKQALYWMI 92
           K + PS NG+E ENE+S+S+ DLDNIVG+G +S LEE DPP  L CELRPYQ+QAL+WMI
Sbjct: 300 KFKNPSPNGNEVENEESISDTDLDNIVGIGDNSYLEERDPPSTLQCELRPYQRQALHWMI 359

Query: 91  QMEKGRSMDETTTTLHPCWEAYRLADK 11
           Q+EKG  MDE  TTLHPCW+AYRLADK
Sbjct: 360 QLEKGPCMDEAGTTLHPCWDAYRLADK 386


>emb|CBI17093.3| unnamed protein product [Vitis vinifera]
          Length = 1025

 Score =  135 bits (340), Expect = 3e-30
 Identities = 61/87 (70%), Positives = 72/87 (82%)
 Frame = -3

Query: 271 KSERPSQNGHENENEDSVSEIDLDNIVGVGSSSDLEEMDPPGNLLCELRPYQKQALYWMI 92
           K + PS NG+E ENE+S+S+ DLDNIVG+G +S LEE DPP  L CELRPYQ+QAL+WMI
Sbjct: 296 KFKNPSPNGNEVENEESISDTDLDNIVGIGDNSYLEERDPPSTLQCELRPYQRQALHWMI 355

Query: 91  QMEKGRSMDETTTTLHPCWEAYRLADK 11
           Q+EKG  MDE  TTLHPCW+AYRLADK
Sbjct: 356 QLEKGPCMDEAGTTLHPCWDAYRLADK 382


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