BLASTX nr result

ID: Glycyrrhiza23_contig00033109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033109
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534113.1| PREDICTED: probable cyclic nucleotide-gated ...   114   6e-24
ref|XP_003548318.1| PREDICTED: probable cyclic nucleotide-gated ...   110   9e-23
ref|XP_002270141.2| PREDICTED: probable cyclic nucleotide-gated ...   106   2e-21
emb|CBI35306.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_003634326.1| PREDICTED: probable cyclic nucleotide-gated ...   105   4e-21

>ref|XP_003534113.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 781

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/77 (67%), Positives = 60/77 (77%)
 Frame = +3

Query: 9   HFECSKFIDCGHGDIRGFQNDTNWIHWKTNANASACFTEDGFEYGIYLKAVNLTTKPNVS 188
           H EC+KFIDCGHG     QN+    +W++N+ AS+CFTEDGF YGIY KAVNLT   NV 
Sbjct: 412 HNECAKFIDCGHGQAEENQNNPTLHNWRSNSEASSCFTEDGFPYGIYNKAVNLTADQNVI 471

Query: 189 TRYVYSSFWGFQQISSL 239
           TRYVYSSFWGFQQIS+L
Sbjct: 472 TRYVYSSFWGFQQISTL 488


>ref|XP_003548318.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Glycine max]
          Length = 778

 Score =  110 bits (276), Expect = 9e-23
 Identities = 50/75 (66%), Positives = 58/75 (77%)
 Frame = +3

Query: 15  ECSKFIDCGHGDIRGFQNDTNWIHWKTNANASACFTEDGFEYGIYLKAVNLTTKPNVSTR 194
           EC+KFIDCGHG     QN+   ++W+ ++ AS CFTEDGF YGIY KAVNLT   NV TR
Sbjct: 411 ECAKFIDCGHGQAEANQNNAIMLNWRNSSVASVCFTEDGFPYGIYNKAVNLTADHNVITR 470

Query: 195 YVYSSFWGFQQISSL 239
           YVYSSFWGFQQIS+L
Sbjct: 471 YVYSSFWGFQQISTL 485


>ref|XP_002270141.2| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Vitis vinifera]
          Length = 779

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/77 (64%), Positives = 60/77 (77%), Gaps = 3/77 (3%)
 Frame = +3

Query: 18  CSKFIDCGHGD-IRGFQNDTN--WIHWKTNANASACFTEDGFEYGIYLKAVNLTTKPNVS 188
           C  FIDCGHG+ +R F++  N  W  WK+N NASACF++DGF YGIY KAV LTTKP++ 
Sbjct: 413 CMDFIDCGHGEKVRDFRDLRNLDWQPWKSNENASACFSDDGFPYGIYTKAVILTTKPSIV 472

Query: 189 TRYVYSSFWGFQQISSL 239
           TRY YS FWGFQQIS+L
Sbjct: 473 TRYTYSLFWGFQQISTL 489


>emb|CBI35306.3| unnamed protein product [Vitis vinifera]
          Length = 777

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/77 (64%), Positives = 60/77 (77%), Gaps = 3/77 (3%)
 Frame = +3

Query: 18  CSKFIDCGHGD-IRGFQNDTN--WIHWKTNANASACFTEDGFEYGIYLKAVNLTTKPNVS 188
           C  FIDCGHG+ +R F++  N  W  WK+N NASACF++DGF YGIY KAV LTTKP++ 
Sbjct: 411 CMDFIDCGHGEKVRDFRDLRNLDWQPWKSNENASACFSDDGFPYGIYTKAVILTTKPSIV 470

Query: 189 TRYVYSSFWGFQQISSL 239
           TRY YS FWGFQQIS+L
Sbjct: 471 TRYTYSLFWGFQQISTL 487


>ref|XP_003634326.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
           chloroplastic-like [Vitis vinifera]
          Length = 783

 Score =  105 bits (262), Expect = 4e-21
 Identities = 49/76 (64%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
 Frame = +3

Query: 15  ECSKFIDCGHGD-IRGFQNDTNWIHWKTNANASACFTEDGFEYGIYLKAVNLTTKPNVST 191
           +C  FIDCGHGD I  F     W  WK+N NASACF++DGF YGIY +AVNLTTK ++ T
Sbjct: 418 KCMDFIDCGHGDKIGDFMPLPGWPLWKSNENASACFSDDGFPYGIYTQAVNLTTKHSIVT 477

Query: 192 RYVYSSFWGFQQISSL 239
           RY YS FWGFQQIS+L
Sbjct: 478 RYTYSLFWGFQQISTL 493


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