BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033087
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]          92   7e-22
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    95   1e-20
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...    87   1e-16
gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn...    87   2e-15
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...    76   2e-12

>gb|AEL30359.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 1613

 Score = 92.4 bits (228), Expect(2) = 7e-22
 Identities = 47/90 (52%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
 Frame = -1

Query: 267 IFGNIFKHKCILEARMRGIQHTLEHSDFPNLAMLEGELHREYDEVLKQE-LLWYQKSREK 91
           +FGNIF  KC LE ++  +Q  LE  D   L   E +L  +Y+  L QE LLW+QKS E+
Sbjct: 687 VFGNIFVKKCELEQQINYLQKRLEVVDSIYLRQKERQLLDDYNNTLVQEELLWFQKSIEQ 746

Query: 90  WVRFGDRNIKFFHTQTIIRRMRNKIQGMFI 1
           WVRFGDRN +FFH QT+ RR  NKI G+F+
Sbjct: 747 WVRFGDRNTRFFHIQTLARRKHNKIHGLFL 776



 Score = 36.2 bits (82), Expect(2) = 7e-22
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 383 WLTHEQFPSMVQNAWHKGMHSITASLGSVRKDAQEFNSK 267
           W TH  +  +V  +W  G   I   L  V+K++ EFNSK
Sbjct: 648 WATHPGYRDIVNQSWWSGNRGIHGKLSEVQKNSLEFNSK 686


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 1296

 Score = 95.1 bits (235), Expect(2) = 1e-20
 Identities = 45/85 (52%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
 Frame = -1

Query: 267 IFGNIFKHKCILEARMRGIQHTLEHSDFPNLAMLEGELHREYDEVL-KQELLWYQKSREK 91
           +FGNIF+ K  +E R++G+Q  LE  D     +LE EL  EY+ +L ++E+LWYQKSRE+
Sbjct: 287 VFGNIFQRKSRVEWRLKGVQSYLERVDSYRHTLLEKELQDEYNHILFQEEMLWYQKSREQ 346

Query: 90  WVRFGDRNIKFFHTQTIIRRMRNKI 16
           WV+ GD+N  FFH QT+IRR  NKI
Sbjct: 347 WVKLGDKNTAFFHAQTVIRRKWNKI 371



 Score = 29.3 bits (64), Expect(2) = 1e-20
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -2

Query: 383 WLTHEQFPSMVQNAWHKGMHSITASLGSVRKDAQEFN 273
           W+ H  + ++V+ +W    H+ TASL  V +++  FN
Sbjct: 248 WIDHYDYGNVVKRSWSTHTHNPTASLIKVMENSIIFN 284


>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 855

 Score = 87.4 bits (215), Expect(2) = 1e-16
 Identities = 42/86 (48%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
 Frame = -1

Query: 267 IFGNIFKHKCILEARMRGIQHTLEHSDFPNLAMLEGELHREYDEVLKQE-LLWYQKSREK 91
           +FG++ + K  L   ++ +Q  LE +   NL   E EL +E+D VL+QE +LW+QKSREK
Sbjct: 701 VFGDVNRRKESLMNEIKVVQELLEINQTDNLLSKEEELIKEFDVVLEQEEVLWFQKSREK 760

Query: 90  WVRFGDRNIKFFHTQTIIRRMRNKIQ 13
           WV  GDRN K+FHT T++RR RN+I+
Sbjct: 761 WVELGDRNTKYFHTMTVVRRRRNRIE 786



 Score = 23.9 bits (50), Expect(2) = 1e-16
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 383 WLTHEQFPSMVQNAWH 336
           WLTH  F  ++Q +W+
Sbjct: 663 WLTHSGFKDLLQASWN 678


>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
          Length = 464

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/86 (48%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
 Frame = -1

Query: 267 IFGNIFKHKCILEARMRGIQHTLEHSDFPNLAMLEGELHREYDEVLKQE-LLWYQKSREK 91
           +FGNI + K  L   ++ +Q  LEH+   +L   E  L +E++ VL+QE ++W+QKSREK
Sbjct: 257 VFGNIQQRKDKLVQEIQAVQDFLEHNQTDDLLNKEDVLIKEFEVVLEQEEIVWFQKSREK 316

Query: 90  WVRFGDRNIKFFHTQTIIRRMRNKIQ 13
           W+  GDRN K+FHT TIIRR RN+I+
Sbjct: 317 WIALGDRNTKYFHTSTIIRRRRNQIE 342


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
 Frame = -1

Query: 267 IFGNIFKHKCILEARMRGIQHTLEHSDFPNLAMLEGELHREYDEVLKQE-LLWYQKSREK 91
           +FGNI   K  + + ++ +Q  LE     +L M E  L +E+D +L QE  LW+QKSREK
Sbjct: 99  VFGNIHVRKEKVVSDLKAVQDLLEVVQTDDLLMKEDTLLKEFDVLLHQEETLWFQKSREK 158

Query: 90  WVRFGDRNIKFFHTQTIIRRMRNKIQ 13
            +  GDRN  FFHT T+IRR RN+I+
Sbjct: 159 LLALGDRNTTFFHTSTVIRRRRNRIE 184