BLASTX nr result

ID: Glycyrrhiza23_contig00033082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033082
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514156.1| pentatricopeptide repeat-containing protein,...    76   3e-12
ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
emb|CBI27939.3| unnamed protein product [Vitis vinifera]               72   6e-11
ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat...    63   2e-08
ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat...    63   2e-08

>ref|XP_002514156.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546612|gb|EEF48110.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 885

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/68 (50%), Positives = 47/68 (69%)
 Frame = -3

Query: 213 DCTMNAALNEGLSIHEHHLKSGVDPYAHFWISLLNFSAKCGFPTFAHQMLVQMPEQHVPS 34
           +C     LNEG +IH + +KSG++P +H W+SL+N  AKCG   FA ++LV M E+ V S
Sbjct: 102 ECASKGNLNEGTAIHGNVIKSGLEPDSHLWVSLINLYAKCGSLAFARKVLVGMRERDVVS 161

Query: 33  WTALIQGF 10
           WTALI G+
Sbjct: 162 WTALIAGY 169


>ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 1005

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/70 (47%), Positives = 46/70 (65%)
 Frame = -3

Query: 210 CTMNAALNEGLSIHEHHLKSGVDPYAHFWISLLNFSAKCGFPTFAHQMLVQMPEQHVPSW 31
           C     LNEG +IH   +KSG++P +H W SL+N  AKCG   +A ++  ++PE+ V SW
Sbjct: 138 CASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSW 197

Query: 30  TALIQGFGAQ 1
           TALI GF A+
Sbjct: 198 TALITGFVAE 207


>emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/70 (47%), Positives = 46/70 (65%)
 Frame = -3

Query: 210 CTMNAALNEGLSIHEHHLKSGVDPYAHFWISLLNFSAKCGFPTFAHQMLVQMPEQHVPSW 31
           C     LNEG +IH   +KSG++P +H W SL+N  AKCG   +A ++  ++PE+ V SW
Sbjct: 201 CASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSW 260

Query: 30  TALIQGFGAQ 1
           TALI GF A+
Sbjct: 261 TALITGFVAE 270


>ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/71 (39%), Positives = 44/71 (61%)
 Frame = -3

Query: 213 DCTMNAALNEGLSIHEHHLKSGVDPYAHFWISLLNFSAKCGFPTFAHQMLVQMPEQHVPS 34
           +C    +L    +IH   +K  ++P +H W+SL+N  AKC +  +A  +L +MP++ V S
Sbjct: 121 ECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVS 180

Query: 33  WTALIQGFGAQ 1
           WTALIQG  A+
Sbjct: 181 WTALIQGLVAE 191


>ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/71 (39%), Positives = 44/71 (61%)
 Frame = -3

Query: 213 DCTMNAALNEGLSIHEHHLKSGVDPYAHFWISLLNFSAKCGFPTFAHQMLVQMPEQHVPS 34
           +C    +L    +IH   +K  ++P +H W+SL+N  AKC +  +A  +L +MP++ V S
Sbjct: 121 ECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRDVVS 180

Query: 33  WTALIQGFGAQ 1
           WTALIQG  A+
Sbjct: 181 WTALIQGLVAE 191


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