BLASTX nr result

ID: Glycyrrhiza23_contig00033076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033076
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]       184   7e-45
ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789...   184   7e-45
gb|AAC33963.1| contains similarity to reverse transcriptases (Pf...   171   1e-40
ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819...   166   2e-39
emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]   166   2e-39

>gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]
          Length = 635

 Score =  184 bits (468), Expect = 7e-45
 Identities = 91/153 (59%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
 Frame = +2

Query: 8   CPDTRRSITGFCFFLGESLIXXXXXXXXXXXXXXXEAEYRALAQAACEAQWLLYLLHDLQ 187
           C DTRRSI+G CFFLG+SLI               EAEYRA+A A CE QWLLYLL DLQ
Sbjct: 462 CKDTRRSISGHCFFLGQSLICWRTKKQPTVSKSSSEAEYRAMASATCEMQWLLYLLRDLQ 521

Query: 188 IPHPSPVVIYCDNKSAMHIAANPVFHERTKHIEIDCHVVRDKIQAGLLHLLPIPSKDQIA 367
           +      V+YCDN+SAMHIA+NPVFHERTKH+EIDCH+VR+K+QAG+  LLP+ + DQI 
Sbjct: 522 VQCVQLPVLYCDNQSAMHIASNPVFHERTKHLEIDCHIVREKLQAGIFKLLPVTTHDQIG 581

Query: 368 DILTKPLHAGPFTSLHAKLGMLDI-HSSLRGGV 463
           D  TK L+  PF+ L +KLGMLDI H    GG+
Sbjct: 582 DSFTKALYLQPFSLLLSKLGMLDIYHPPTCGGI 614


>ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789964 [Glycine max]
          Length = 2412

 Score =  184 bits (468), Expect = 7e-45
 Identities = 88/153 (57%), Positives = 107/153 (69%)
 Frame = +2

Query: 5    TCPDTRRSITGFCFFLGESLIXXXXXXXXXXXXXXXEAEYRALAQAACEAQWLLYLLHDL 184
            +CP TRRS+TG+C FLG S+                EAEYRALA   CE QWL YL  DL
Sbjct: 1539 SCPATRRSVTGYCVFLGTSMQSWKSKKQSTVARSSSEAEYRALASLTCELQWLQYLFKDL 1598

Query: 185  QIPHPSPVVIYCDNKSAMHIAANPVFHERTKHIEIDCHVVRDKIQAGLLHLLPIPSKDQI 364
             I    P+ +YCDNKSA+++A NP+FHERTKHIEIDCHV+R+KIQ GL+HLLP+ S  Q+
Sbjct: 1599 HISLDQPISVYCDNKSAIYLAHNPIFHERTKHIEIDCHVIREKIQTGLIHLLPVSSAAQL 1658

Query: 365  ADILTKPLHAGPFTSLHAKLGMLDIHSSLRGGV 463
            AD+LTKPL A  F SL +KL +LDIHS   GG+
Sbjct: 1659 ADVLTKPLPAPSFNSLISKLDLLDIHSPACGGL 1691


>gb|AAC33963.1| contains similarity to reverse transcriptases (Pfam; rvt.hmm, score:
            11.19) [Arabidopsis thaliana]
          Length = 1633

 Score =  171 bits (432), Expect = 1e-40
 Identities = 81/137 (59%), Positives = 97/137 (70%)
 Frame = +2

Query: 2    GTCPDTRRSITGFCFFLGESLIXXXXXXXXXXXXXXXEAEYRALAQAACEAQWLLYLLHD 181
            GTC D+RRS+TGFC +LG SLI               E+EYR+LAQA CE  WL  LL D
Sbjct: 1288 GTCKDSRRSVTGFCIYLGTSLITWKSKKQSVVSRSSTESEYRSLAQATCEIIWLQQLLKD 1347

Query: 182  LQIPHPSPVVIYCDNKSAMHIAANPVFHERTKHIEIDCHVVRDKIQAGLLHLLPIPSKDQ 361
            L +    P  ++CDNKSA+H+A NPVFHERTKHIEIDCH VRD+I+AG L  L +P+ +Q
Sbjct: 1348 LHVTMTCPAKLFCDNKSALHLATNPVFHERTKHIEIDCHTVRDQIKAGKLKTLHVPTGNQ 1407

Query: 362  IADILTKPLHAGPFTSL 412
            +ADILTKPLH GPF SL
Sbjct: 1408 LADILTKPLHPGPFHSL 1424


>ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819074 [Glycine max]
          Length = 1750

 Score =  166 bits (421), Expect = 2e-39
 Identities = 80/152 (52%), Positives = 104/152 (68%), Gaps = 1/152 (0%)
 Frame = +2

Query: 8    CPDTRRSITGFCFFLGESLIXXXXXXXXXXXXXXXEAEYRALAQAACEAQWLLYLLHDLQ 187
            C D+R+SI+G+CFF+G+SL+               EAEYRAL+ AACE QWLLYL  DL+
Sbjct: 1102 CMDSRKSISGYCFFIGKSLVSWRAKKQATVSRSSSEAEYRALSSAACELQWLLYLFADLR 1161

Query: 188  IPHPSPVVIYCDNKSAMHIAANPVFHERTKHIEIDCHVVRDKIQAGLLHLLPIPSKDQIA 367
            +       +YCDN+SA+HIA+NPVFHERTKH+EIDCH+VR+K+  G L LLP+ + DQ+A
Sbjct: 1162 VQLTRTPTLYCDNQSAVHIASNPVFHERTKHLEIDCHLVREKLLKGTLKLLPVSTSDQVA 1221

Query: 368  DILTKPLHAGPFTSLHAKLGMLDI-HSSLRGG 460
            D LTK L    F    +KL M++I H  L GG
Sbjct: 1222 DFLTKALAPPKFHDFVSKLSMINIYHDKLEGG 1253


>emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
          Length = 1279

 Score =  166 bits (421), Expect = 2e-39
 Identities = 80/146 (54%), Positives = 99/146 (67%)
 Frame = +2

Query: 8    CPDTRRSITGFCFFLGESLIXXXXXXXXXXXXXXXEAEYRALAQAACEAQWLLYLLHDLQ 187
            CP +RRS TG+C FLG SLI               EAEYRA+A   CE  WL  LL DL+
Sbjct: 1132 CPISRRSTTGYCVFLGSSLISWRTKRQKTVSLSSAEAEYRAMAGTCCELSWLRSLLKDLR 1191

Query: 188  IPHPSPVVIYCDNKSAMHIAANPVFHERTKHIEIDCHVVRDKIQAGLLHLLPIPSKDQIA 367
            I HP P ++YCDN +A+HIAANPVFHERT+HIE+DCH +RDKIQ G +    I S +Q+A
Sbjct: 1192 ILHPKPALLYCDNTAALHIAANPVFHERTRHIEMDCHFIRDKIQDGSVVTKHIASTBQLA 1251

Query: 368  DILTKPLHAGPFTSLHAKLGMLDIHS 445
            D+ TKPL    F+++  KLG+LDIHS
Sbjct: 1252 DVFTKPLGKETFSTMIHKLGVLDIHS 1277


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