BLASTX nr result

ID: Glycyrrhiza23_contig00033051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00033051
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552944.1| PREDICTED: RING-H2 finger protein ATL60-like...   115   4e-24
ref|XP_002278655.1| PREDICTED: RING-H2 finger protein ATL5 [Viti...    96   2e-18
ref|XP_003544302.1| PREDICTED: RING-H2 finger protein ATL3-like ...    78   8e-13
ref|XP_004145311.1| PREDICTED: RING-H2 finger protein ATL2-like ...    75   5e-12
ref|XP_003615755.1| RING-H2 zinc finger protein [Medicago trunca...    68   7e-10

>ref|XP_003552944.1| PREDICTED: RING-H2 finger protein ATL60-like [Glycine max]
          Length = 268

 Score =  115 bits (288), Expect = 4e-24
 Identities = 60/88 (68%), Positives = 62/88 (70%)
 Frame = +3

Query: 48  SDVLGPARFHHFHSFNIEDSPLSSSHTKGLDSSIIATIPLFMYASAAXXXXXXXXXXXXC 227
           SDVLGPARFHHFHSFNIEDS  S   TKGLDSS I TIPLF+Y                C
Sbjct: 77  SDVLGPARFHHFHSFNIEDS--SPLTTKGLDSSTIRTIPLFIY-EPNNNKVQEEEEELEC 133

Query: 228 VICLSAFEDGVMGRCLPKCGHGFHVECI 311
           VICLSAF  G +GRCLPKCGHGFHVECI
Sbjct: 134 VICLSAFVSGEVGRCLPKCGHGFHVECI 161


>ref|XP_002278655.1| PREDICTED: RING-H2 finger protein ATL5 [Vitis vinifera]
           gi|297745866|emb|CBI15922.3| unnamed protein product
           [Vitis vinifera]
          Length = 267

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/88 (56%), Positives = 58/88 (65%)
 Frame = +3

Query: 48  SDVLGPARFHHFHSFNIEDSPLSSSHTKGLDSSIIATIPLFMYASAAXXXXXXXXXXXXC 227
           S VL P RFHHFH+F  E + LS S TKGLDSS I++IPLF+Y +              C
Sbjct: 68  SHVLRPTRFHHFHTFTFETT-LSGSPTKGLDSSAISSIPLFVYKAEEHKHGLE------C 120

Query: 228 VICLSAFEDGVMGRCLPKCGHGFHVECI 311
           VICLS FED  +GR LPKCGH FHV+CI
Sbjct: 121 VICLSVFEDDDVGRNLPKCGHAFHVQCI 148


>ref|XP_003544302.1| PREDICTED: RING-H2 finger protein ATL3-like [Glycine max]
          Length = 241

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 44/88 (50%), Positives = 52/88 (59%)
 Frame = +3

Query: 48  SDVLGPARFHHFHSFNIEDSPLSSSHTKGLDSSIIATIPLFMYASAAXXXXXXXXXXXXC 227
           S VL P+   HFHS NIE SP  S   KGLDS+ ++ IPLF+                 C
Sbjct: 72  SGVLEPS---HFHSINIEASPTCS---KGLDSATLSAIPLFVQGPEKTEETEELE----C 121

Query: 228 VICLSAFEDGVMGRCLPKCGHGFHVECI 311
           VICLS  E+G +GR LPKCGH FH+ECI
Sbjct: 122 VICLSVIEEGEIGRRLPKCGHAFHMECI 149


>ref|XP_004145311.1| PREDICTED: RING-H2 finger protein ATL2-like [Cucumis sativus]
           gi|449472887|ref|XP_004153724.1| PREDICTED: RING-H2
           finger protein ATL2-like [Cucumis sativus]
           gi|449527173|ref|XP_004170587.1| PREDICTED: RING-H2
           finger protein ATL2-like [Cucumis sativus]
          Length = 245

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 43/90 (47%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
 Frame = +3

Query: 48  SDVLGPARFHHFHS--FNIEDSPLSSSHTKGLDSSIIATIPLFMYASAAXXXXXXXXXXX 221
           S VL P R   F S  F++  +P   S++KGLD S+I+ IPLF+Y S             
Sbjct: 63  SYVLAPPRLSRFDSVPFDLGSAP---SNSKGLDPSVISAIPLFVYESEEKKCAAAAAAME 119

Query: 222 XCVICLSAFEDGVMGRCLPKCGHGFHVECI 311
            CVICLS FE+  +GR LPKC HGFH+ECI
Sbjct: 120 -CVICLSEFEERELGRRLPKCRHGFHLECI 148


>ref|XP_003615755.1| RING-H2 zinc finger protein [Medicago truncatula]
           gi|355517090|gb|AES98713.1| RING-H2 zinc finger protein
           [Medicago truncatula]
          Length = 237

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/88 (44%), Positives = 48/88 (54%)
 Frame = +3

Query: 48  SDVLGPARFHHFHSFNIEDSPLSSSHTKGLDSSIIATIPLFMYASAAXXXXXXXXXXXXC 227
           SD+     FHH   FNI+  P      KGL+S+ ++TIP F+                 C
Sbjct: 45  SDIPISPNFHHH--FNIQSPPF-----KGLNSTTLSTIPTFVSEEKTQELE--------C 89

Query: 228 VICLSAFEDGVMGRCLPKCGHGFHVECI 311
           VICLS  E+G +GR LPKCGH FHVECI
Sbjct: 90  VICLSYIEEGEIGRKLPKCGHAFHVECI 117


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